| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13885 | 5:21,159,558-21,162,052 | - | C1H5g24969 | CX5g040440 | LOC_Os05g43450 | Os05g0509900 | - | Detail |
| C2H5g06315 | 5:21,164,822-21,165,532 | + | C1H5g08854 | CX5g037150 | LOC_Os05g43460 | Os05g0510100 | - | Detail |
| C2H5g30303 | 5:21,166,827-21,170,732 | - | C1H5g22806 | CX5g036841 | LOC_Os05g43470 | Os05g0510200 | - | Detail |
| C2H5g11558 | 5:21,172,696-21,179,009 | + | C1H5g07819 | CX5g039782 | LOC_Os05g43480 | Os05g0510300 | - | Detail |
| C2H5g22480 | 5:21,182,077-21,185,636 | + | C1H5g09587 | CX5g039818 | LOC_Os05g43490 | Os05g0510400 | - | Detail |
| C2H5g26605 | 5:21,187,931-21,190,956 | - | - | CX5g040157 | - | - | - | Detail |
| C2H5g22816 | 5:21,192,067-21,193,914 | - | C1H5g05512 | CX5g039867 | LOC_Os05g43510 | Os05g0510600 | - | Detail |
| C2H5g29168 | 5:21,196,858-21,200,299 | + | C1H5g15170 | CX5g039522 | - | - | - | Detail |
| C2H5g01065 | 5:21,204,745-21,209,968 | + | C1H5g30650 | CX5g037054 | LOC_Os05g43610 | Os05g0512000 | - | Detail |
| C2H5g14988 | 5:21,211,522-21,213,535 | + | C1H5g28010 | CX5g038702 | LOC_Os05g43590 | Os05g0511800 | - | Detail |
| C2H5g08259 | 5:21,214,874-21,217,507 | - | C1H5g12550 | CX5g037699 | LOC_Os05g43582 | Os05g0511700 | - | Detail |
| C2H5g13482 | 5:21,218,435-21,220,554 | - | C1H5g02902 | CX5g037939 | LOC_Os05g43576 | Os05g0511500 | - | Detail |
| C2H5g00019 | 5:21,225,009-21,232,847 | + | C1H5g23395 | CX5g039648 | LOC_Os05g43570 | Os05g0511400 | - | Detail |
| C2H5g01181 | 5:21,233,627-21,242,956 | + | C1H5g31163 | - | LOC_Os05g43560 | Os05g0511300 | - | Detail |
| C2H5g05981 | 5:21,245,543-21,246,844 | - | C1H5g31608 | CX5g038504 | LOC_Os05g43550 | Os05g0511050 | - | Detail |
| C2H5g08192 | 5:21,248,059-21,250,177 | - | C1H5g23826 | CX5g036939 | LOC_Os05g43540 | Os05g0511000 | - | Detail |
| C2H5g06890 | 5:21,258,675-21,262,347 | + | C1H5g01984 | CX5g041060 | LOC_Os05g43530 | Os05g0510800 | OsCSLC7 | Detail |
| C2H5g29614 | 5:21,264,108-21,267,812 | - | C1H5g13246 | CX5g039667 | LOC_Os05g43520 | Os05g0510700 | - | Detail |
| C2H5g06953 | 5:21,282,603-21,283,121 | + | C1H5g03553 | CX5g040965 | LOC_Os05g43640 | Os05g0512100 | - | Detail |
| C2H5g26211 | 5:21,285,827-21,288,612 | + | C1H5g21736 | CX5g040742 | LOC_Os05g43650 | Os05g0512200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026824 | 3:15,435,031-15,437,838 | + | C1H3g13446 | C2H3g28547 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| CX3g028485 | 3:15,439,239-15,441,064 | + | C1H3g17384 | C2H3g05086 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| CX3g026254 | 3:15,447,964-15,451,988 | - | C1H3g16278 | C2H3g03300 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| CX3g025249 | 3:15,486,635-15,491,017 | + | C1H3g01152 | C2H3g18598 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| CX3g027118 | 3:15,497,323-15,498,193 | + | C1H3g29513 | C2H3g25598 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| CX3g026464 | 3:15,503,089-15,503,973 | - | C1H3g14020 | C2H3g13302 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| CX3g027848 | 3:15,507,527-15,507,883 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g026817 | 3:15,522,966-15,526,393 | + | C1H3g23937 | C2H3g28011 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| CX3g030482 | 3:15,544,040-15,550,026 | + | C1H3g13193 | C2H3g06222 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| CX3g027945 | 3:15,551,274-15,551,981 | - | - | - | - | - | - | Detail |
| CX3g029713 | 3:15,561,408-15,564,398 | + | C1H3g10486 | C2H3g21811 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| CX3g028025 | 3:15,564,931-15,565,485 | + | - | - | - | - | - | Detail |
| CX3g028183 | 3:15,574,170-15,580,479 | - | C1H3g17935 | C2H3g29744 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| CX3g027439 | 3:15,599,950-15,600,198 | + | - | - | - | - | - | Detail |
| CX3g030098 | 3:15,611,210-15,611,461 | + | - | - | - | - | - | Detail |
| CX3g030572 | 3:15,612,626-15,613,711 | - | - | - | LOC_Os03g30060 | Os03g0414100 | - | Detail |
| CX3g027342 | 3:15,630,299-15,631,328 | - | C1H3g00999 | - | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| CX3g027205 | 3:15,633,290-15,633,532 | + | - | - | - | - | - | Detail |
| CX3g026035 | 3:15,662,310-15,663,101 | + | C1H3g09941 | C2H3g13977 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| CX3g029525 | 3:15,668,677-15,668,874 | + | - | - | - | - | - | Detail |