| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g24831 | 5:22,965,867-22,966,685 | + | C2H5g26586 | CX5g036692 | LOC_Os05g48900 | Os05g0563600 | - | Detail |
| C1H5g28795 | 5:22,981,163-22,981,924 | + | C2H5g19965 | CX1g003489 | LOC_Os05g48930 | Os05g0149950 | - | Detail |
| C1H5g01891 | 5:22,986,406-22,990,077 | - | C2H5g30565 | CX5g038036 | LOC_Os05g48940 | Os05g0564000 | - | Detail |
| C1H5g27525 | 5:22,990,659-22,991,333 | + | C2H5g09559 | - | LOC_Os05g48950 | Os05g0564100 | - | Detail |
| C1H5g29642 | 5:22,998,567-22,999,472 | + | C2H5g04888 | CX5g040225 | LOC_Os05g48960 | Os05g0564200 | - | Detail |
| C1H5g01424 | 5:23,002,465-23,009,620 | + | C2H5g15150 | CX5g038798 | LOC_Os05g48970 | Os05g0564300 | - | Detail |
| C1H5g14301 | 5:23,010,037-23,011,783 | - | C2H5g21685 | CX5g039483 | LOC_Os05g48980 | Os05g0564400 | - | Detail |
| C1H5g26322 | 5:23,018,190-23,019,554 | + | C2H5g04875 | CX5g036954 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| C1H5g22531 | 5:23,021,822-23,023,267 | + | C2H5g04875 | CX5g036954 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| C1H5g22284 | 5:23,025,779-23,026,913 | - | C2H5g03360 | CX5g040209 | LOC_Os05g49010 | Os05g0564700 | - | Detail |
| C1H5g11743 | 5:23,029,665-23,031,523 | + | C2H5g08970 | CX5g037646 | LOC_Os05g49020 | Os05g0564800 | - | Detail |
| C1H5g09043 | 5:23,032,027-23,034,181 | + | C2H5g20403 | CX5g037646 | LOC_Os05g49030 | Os05g0565000 | - | Detail |
| C1H5g09274 | 5:23,036,925-23,038,827 | + | C2H5g24526 | CX5g038379 | LOC_Os05g49040 | Os05g0565100 | - | Detail |
| C1H5g19442 | 5:23,039,052-23,041,716 | + | C2H5g06163 | CX5g040804 | LOC_Os05g49050 | Os05g0565200 | - | Detail |
| C1H5g17900 | 5:23,044,938-23,046,877 | - | C2H5g13806 | CX5g038249 | - | - | - | Detail |
| C1H5g08734 | 5:23,048,230-23,051,078 | - | C2H5g19958 | CX5g039855 | LOC_Os05g49060 | Os05g0565400 | - | Detail |
| C1H5g23266 | 5:23,051,535-23,052,473 | - | C2H5g07466 | CX5g040924 | LOC_Os05g49070 | Os05g0565500 | - | Detail |
| C1H5g16562 | 5:23,052,833-23,053,243 | - | C2H5g00600 | CX5g037715 | LOC_Os05g49080 | Os05g0565701 | - | Detail |
| C1H5g03208 | 5:23,070,151-23,073,110 | + | C2H5g29804 | CX5g039821 | LOC_Os05g49100 | Os05g0565900 | - | Detail |
| C1H5g11149 | 5:23,078,040-23,083,585 | + | C2H5g02921 | CX5g036693 | LOC_Os05g49120 | Os05g0566200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026824 | 3:15,435,031-15,437,838 | + | C1H3g13446 | C2H3g28547 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| CX3g028485 | 3:15,439,239-15,441,064 | + | C1H3g17384 | C2H3g05086 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| CX3g026254 | 3:15,447,964-15,451,988 | - | C1H3g16278 | C2H3g03300 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| CX3g025249 | 3:15,486,635-15,491,017 | + | C1H3g01152 | C2H3g18598 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| CX3g027118 | 3:15,497,323-15,498,193 | + | C1H3g29513 | C2H3g25598 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| CX3g026464 | 3:15,503,089-15,503,973 | - | C1H3g14020 | C2H3g13302 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| CX3g027848 | 3:15,507,527-15,507,883 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g026817 | 3:15,522,966-15,526,393 | + | C1H3g23937 | C2H3g28011 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| CX3g030482 | 3:15,544,040-15,550,026 | + | C1H3g13193 | C2H3g06222 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| CX3g027945 | 3:15,551,274-15,551,981 | - | - | - | - | - | - | Detail |
| CX3g029713 | 3:15,561,408-15,564,398 | + | C1H3g10486 | C2H3g21811 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| CX3g028025 | 3:15,564,931-15,565,485 | + | - | - | - | - | - | Detail |
| CX3g028183 | 3:15,574,170-15,580,479 | - | C1H3g17935 | C2H3g29744 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| CX3g027439 | 3:15,599,950-15,600,198 | + | - | - | - | - | - | Detail |
| CX3g030098 | 3:15,611,210-15,611,461 | + | - | - | - | - | - | Detail |
| CX3g030572 | 3:15,612,626-15,613,711 | - | - | - | LOC_Os03g30060 | Os03g0414100 | - | Detail |
| CX3g027342 | 3:15,630,299-15,631,328 | - | C1H3g00999 | - | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| CX3g027205 | 3:15,633,290-15,633,532 | + | - | - | - | - | - | Detail |
| CX3g026035 | 3:15,662,310-15,663,101 | + | C1H3g09941 | C2H3g13977 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| CX3g029525 | 3:15,668,677-15,668,874 | + | - | - | - | - | - | Detail |