| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g31633 | 4:30,773,642-30,775,424 | - | C2H4g27045 | - | LOC_Os04g59200 | Os04g0688500 | - | Detail |
| C1H4g24789 | 4:30,781,278-30,782,378 | - | C2H4g21882 | - | LOC_Os04g59210 | Os04g0688600 | - | Detail |
| C1H4g27691 | 4:30,785,489-30,786,585 | - | C2H4g02467 | - | LOC_Os04g59260 | Os04g0689000 | - | Detail |
| C1H4g07402 | 4:30,792,057-30,795,189 | - | C2H4g27148 | CX4g032771 | LOC_Os04g59310 | Os04g0689300 | - | Detail |
| C1H4g17177 | 4:30,795,950-30,801,882 | + | C2H4g29368 | CX4g034793 | LOC_Os04g59320 | Os04g0689400 | - | Detail |
| C1H4g15962 | 4:30,802,927-30,804,443 | + | C2H4g10646 | CX4g031663 | LOC_Os04g59330 | Os04g0689500 | - | Detail |
| C1H4g05384 | 4:30,808,333-30,809,374 | + | C2H4g21499 | CX4g036307 | LOC_Os04g59340 | Os04g0689700 | - | Detail |
| C1H4g05536 | 4:30,812,981-30,815,644 | + | C2H4g01472 | CX4g034950 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C1H4g14916 | 4:30,828,732-30,829,906 | + | C2H4g12610 | CX4g032101 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C1H4g15741 | 4:30,831,785-30,833,168 | + | C2H4g18186 | CX4g031741 | LOC_Os04g59370 | Os04g0689900 | - | Detail |
| C1H4g21540 | 4:30,842,144-30,844,557 | + | C2H4g13638 | CX4g034943 | LOC_Os04g59380 | Os04g0690100 | - | Detail |
| C1H4g10285 | 4:30,846,890-30,852,606 | + | C2H4g23794 | CX4g032712 | LOC_Os04g59394 | Os04g0690300 | - | Detail |
| C1H4g14673 | 4:30,854,640-30,858,089 | + | C2H4g10236 | CX4g035891 | LOC_Os04g59400 | Os04g0690400 | - | Detail |
| C1H4g07117 | 4:30,869,661-30,870,456 | + | C2H4g10344 | CX4g034143 | LOC_Os04g59420 | Os04g0690500 | - | Detail |
| C1H4g16012 | 4:30,872,740-30,875,076 | - | C2H4g01830 | CX4g032346 | LOC_Os04g59430 | Os04g0690600 | - | Detail |
| C1H4g05861 | 4:30,884,493-30,886,437 | + | C2H4g11677 | CX4g034110 | LOC_Os04g59450 | Os04g0691100 | SAPK5, OsSAPK5 | Detail |
| C1H4g07779 | 4:30,886,946-30,895,853 | - | C2H4g24101 | CX4g036214 | LOC_Os04g59460 | Os04g0691200 | - | Detail |
| C1H4g13585 | 4:30,901,299-30,902,180 | - | C2H4g14210 | CX4g036345 | LOC_Os04g59470 | Os04g0691300 | - | Detail |
| C1H4g12409 | 4:30,902,992-30,905,328 | + | C2H4g07706 | CX4g035525 | LOC_Os04g59480 | Os04g0691400 | - | Detail |
| C1H4g07625 | 4:30,912,742-30,924,866 | + | C2H4g03071 | CX4g032924 | LOC_Os04g59494 | Os04g0691500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026824 | 3:15,435,031-15,437,838 | + | C1H3g13446 | C2H3g28547 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| CX3g028485 | 3:15,439,239-15,441,064 | + | C1H3g17384 | C2H3g05086 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| CX3g026254 | 3:15,447,964-15,451,988 | - | C1H3g16278 | C2H3g03300 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| CX3g025249 | 3:15,486,635-15,491,017 | + | C1H3g01152 | C2H3g18598 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| CX3g027118 | 3:15,497,323-15,498,193 | + | C1H3g29513 | C2H3g25598 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| CX3g026464 | 3:15,503,089-15,503,973 | - | C1H3g14020 | C2H3g13302 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| CX3g027848 | 3:15,507,527-15,507,883 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g026817 | 3:15,522,966-15,526,393 | + | C1H3g23937 | C2H3g28011 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| CX3g030482 | 3:15,544,040-15,550,026 | + | C1H3g13193 | C2H3g06222 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| CX3g027945 | 3:15,551,274-15,551,981 | - | - | - | - | - | - | Detail |
| CX3g029713 | 3:15,561,408-15,564,398 | + | C1H3g10486 | C2H3g21811 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| CX3g028025 | 3:15,564,931-15,565,485 | + | - | - | - | - | - | Detail |
| CX3g028183 | 3:15,574,170-15,580,479 | - | C1H3g17935 | C2H3g29744 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| CX3g027439 | 3:15,599,950-15,600,198 | + | - | - | - | - | - | Detail |
| CX3g030098 | 3:15,611,210-15,611,461 | + | - | - | - | - | - | Detail |
| CX3g030572 | 3:15,612,626-15,613,711 | - | - | - | LOC_Os03g30060 | Os03g0414100 | - | Detail |
| CX3g027342 | 3:15,630,299-15,631,328 | - | C1H3g00999 | - | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| CX3g027205 | 3:15,633,290-15,633,532 | + | - | - | - | - | - | Detail |
| CX3g026035 | 3:15,662,310-15,663,101 | + | C1H3g09941 | C2H3g13977 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| CX3g029525 | 3:15,668,677-15,668,874 | + | - | - | - | - | - | Detail |