| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g26846 | 7:4,051,215-4,053,845 | - | C2H7g12614 | CX7g049916 | LOC_Os07g08960 | Os07g0549800 | - | Detail |
| C1H7g27888 | 7:4,055,397-4,059,244 | - | C2H7g29149 | CX7g048853 | LOC_Os07g08970 | Os07g0187400 | - | Detail |
| C1H7g28076 | 7:4,064,343-4,068,533 | + | C2H7g29227 | CX7g047749 | LOC_Os07g09000 | Os07g0187700 | PHF1, OsPHF1, OsWD40-137, OsSEC12 | Detail |
| C1H7g18469 | 7:4,085,426-4,094,642 | - | C2H7g16781 | CX7g050137 | LOC_Os07g09020 | Os07g0188000 | - | Detail |
| C1H7g07933 | 7:4,103,695-4,110,243 | + | C2H7g28352 | CX7g048045 | LOC_Os07g09040 | Os07g0188233 | - | Detail |
| C1H7g27796 | 7:4,111,560-4,112,658 | + | C2H7g22140 | CX7g049512 | LOC_Os07g09040 | Os07g0188266 | - | Detail |
| C1H7g22647 | 7:4,116,074-4,119,727 | + | C2H7g15428 | CX7g048570 | LOC_Os07g09050 | Os07g0188700 | - | Detail |
| C1H7g27182 | 7:4,121,105-4,127,985 | + | C2H7g12617 | CX7g050262 | LOC_Os07g09060 | Os07g0188800 | - | Detail |
| C1H7g00471 | 7:4,136,109-4,139,023 | - | C2H7g28551 | CX7g050068 | LOC_Os07g09120 | - | - | Detail |
| C1H7g03181 | 7:4,149,708-4,150,857 | + | C2H7g19166 | CX7g047473 | LOC_Os07g09140 | Os07g0189700 | - | Detail |
| C1H7g25864 | 7:4,151,242-4,153,259 | - | C2H7g28408 | CX7g046048 | LOC_Os07g09150 | Os07g0189800 | - | Detail |
| C1H7g20037 | 7:4,180,816-4,183,550 | + | C2H7g24230 | CX7g048358 | LOC_Os07g09190 | Os07g0190000 | OsDXS3 | Detail |
| C1H7g23271 | 7:4,190,042-4,191,950 | - | C2H7g18700 | CX7g049011 | - | Os07g0190650 | - | Detail |
| C1H7g26325 | 7:4,192,516-4,193,724 | - | C2H7g22120 | CX7g047379 | LOC_Os07g09310 | Os07g0190800 | - | Detail |
| C1H7g15836 | 7:4,194,500-4,201,803 | - | C2H7g22120 | CX7g049482 | LOC_Os07g09320 | Os07g0190900 | - | Detail |
| C1H7g18263 | 7:4,201,932-4,205,353 | + | C2H7g02397 | CX7g050122 | LOC_Os07g09330 | Os07g0191000 | - | Detail |
| C1H7g09411 | 7:4,227,210-4,233,670 | + | C2H7g01228 | CX7g046991 | LOC_Os07g09340 | Os07g0191200 | - | Detail |
| C1H7g12747 | 7:4,239,504-4,240,886 | + | C2H7g20885 | CX7g046027 | LOC_Os07g09384 | Os07g0191600 | STR2 | Detail |
| C1H7g06329 | 7:4,242,707-4,245,276 | + | C2H7g10398 | CX7g047220 | - | Os07g0288700 | - | Detail |
| C1H7g03523 | 7:4,246,658-4,247,243 | + | C2H7g01978 | CX7g049537 | - | Os07g0191650 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026824 | 3:15,435,031-15,437,838 | + | C1H3g13446 | C2H3g28547 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| CX3g028485 | 3:15,439,239-15,441,064 | + | C1H3g17384 | C2H3g05086 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| CX3g026254 | 3:15,447,964-15,451,988 | - | C1H3g16278 | C2H3g03300 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| CX3g025249 | 3:15,486,635-15,491,017 | + | C1H3g01152 | C2H3g18598 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| CX3g027118 | 3:15,497,323-15,498,193 | + | C1H3g29513 | C2H3g25598 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| CX3g026464 | 3:15,503,089-15,503,973 | - | C1H3g14020 | C2H3g13302 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| CX3g027848 | 3:15,507,527-15,507,883 | - | - | C2H12g28081 | LOC_Os01g54740 | Os06g0629362 | - | Detail |
| CX3g026817 | 3:15,522,966-15,526,393 | + | C1H3g23937 | C2H3g28011 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| CX3g030482 | 3:15,544,040-15,550,026 | + | C1H3g13193 | C2H3g06222 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| CX3g027945 | 3:15,551,274-15,551,981 | - | - | - | - | - | - | Detail |
| CX3g029713 | 3:15,561,408-15,564,398 | + | C1H3g10486 | C2H3g21811 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| CX3g028025 | 3:15,564,931-15,565,485 | + | - | - | - | - | - | Detail |
| CX3g028183 | 3:15,574,170-15,580,479 | - | C1H3g17935 | C2H3g29744 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| CX3g027439 | 3:15,599,950-15,600,198 | + | - | - | - | - | - | Detail |
| CX3g030098 | 3:15,611,210-15,611,461 | + | - | - | - | - | - | Detail |
| CX3g030572 | 3:15,612,626-15,613,711 | - | - | - | LOC_Os03g30060 | Os03g0414100 | - | Detail |
| CX3g027342 | 3:15,630,299-15,631,328 | - | C1H3g00999 | - | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| CX3g027205 | 3:15,633,290-15,633,532 | + | - | - | - | - | - | Detail |
| CX3g026035 | 3:15,662,310-15,663,101 | + | C1H3g09941 | C2H3g13977 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| CX3g029525 | 3:15,668,677-15,668,874 | + | - | - | - | - | - | Detail |