| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g22870 | 1:4,587,065-4,587,664 | - | C1H1g28329 | CX1g000104 | LOC_Os01g10010 | Os01g0196500 | - | Detail |
| C2H1g12871 | 1:4,589,682-4,591,118 | + | C1H1g05499 | CX1g005979 | LOC_Os01g10020 | Os01g0196600 | - | Detail |
| C2H1g28373 | 1:4,605,875-4,613,282 | + | C1H1g14618 | CX1g004524 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| C2H1g18174 | 1:4,615,122-4,620,409 | - | C1H1g20387 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C2H1g08298 | 1:4,623,015-4,623,565 | + | - | CX1g005103 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| C2H1g17197 | 1:4,624,739-4,627,138 | + | C1H1g24747 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C2H1g01272 | 1:4,627,592-4,629,505 | - | C1H1g01968 | CX1g004435 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| C2H1g12602 | 1:4,630,262-4,632,510 | - | C1H1g23699 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C2H1g29964 | 1:4,638,301-4,642,740 | - | C1H1g02388 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C2H1g10405 | 1:4,651,798-4,653,068 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10130 | Os01g0197900 | OsRDR3 | Detail |
| C2H1g14250 | 1:4,653,235-4,665,018 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g22382 | 1:4,665,514-4,666,916 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g06287 | 1:4,668,151-4,669,334 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g09190 | 1:4,669,519-4,679,023 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g16198 | 1:4,679,850-4,683,835 | - | C1H1g16458 | CX1g006534 | - | Os01g0198000 | OsRDR4 | Detail |
| C2H1g26620 | 1:4,688,816-4,695,355 | - | C1H1g16973 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C2H1g23718 | 1:4,705,402-4,706,118 | - | C1H1g29548 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C2H1g20955 | 1:4,726,171-4,726,818 | + | - | CX1g000304 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| C2H1g09712 | 1:4,734,659-4,735,255 | + | - | CX1g000572 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| C2H1g26709 | 1:4,738,822-4,743,043 | - | C1H1g25179 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026877 | 3:15,211,770-15,215,340 | + | C1H3g31034 | C2H3g23059 | LOC_Os03g29340 | Os03g0406900 | OsMac4 | Detail |
| CX3g030450 | 3:15,214,980-15,222,829 | - | C1H3g30818 | C2H3g26359 | LOC_Os03g29350 | Os03g0407000 | - | Detail |
| CX3g026274 | 3:15,245,834-15,251,336 | - | C1H3g12617 | C2H3g08674 | - | Os03g0407400 | GS3 | Detail |
| CX3g026747 | 3:15,258,745-15,259,799 | - | - | - | - | - | - | Detail |
| CX3g025160 | 3:15,264,471-15,267,808 | - | C1H3g17471 | C2H3g00647 | LOC_Os03g29410 | Os03g0407900 | - | Detail |
| CX3g026944 | 3:15,290,557-15,290,997 | + | C1H2g00014 | - | LOC_Os03g29460 | Os03g0408300 | - | Detail |
| CX3g027064 | 3:15,298,388-15,303,219 | + | C1H3g10731 | C2H3g15951 | LOC_Os03g29470 | Os03g0408500 | - | Detail |
| CX3g025952 | 3:15,305,898-15,307,536 | - | C1H3g25797 | - | LOC_Os03g29480 | Os03g0408600 | NSP1, Os NSP1, NSP1 | Detail |
| CX3g029761 | 3:15,332,376-15,333,288 | - | C1H3g30334 | C2H3g24060 | LOC_Os03g29540 | Os03g0409100 | - | Detail |
| CX3g026777 | 3:15,337,295-15,341,542 | - | C1H3g31871 | C2H3g04400 | LOC_Os03g29570 | Os03g0409400 | - | Detail |
| CX3g031255 | 3:15,343,358-15,345,703 | + | C1H3g21807 | C2H3g25735 | LOC_Os03g29584 | - | - | Detail |
| CX3g026419 | 3:15,359,350-15,359,946 | - | C1H3g05344 | C2H3g22866 | - | Os03g0335100 | - | Detail |
| CX3g031178 | 3:15,360,644-15,363,953 | + | C1H3g12159 | C2H3g24065 | LOC_Os03g29630 | Os03g0410100 | - | Detail |
| CX3g028823 | 3:15,368,452-15,368,697 | + | - | - | - | - | - | Detail |
| CX3g026992 | 3:15,377,536-15,377,880 | - | C1H3g17148 | C2H3g24471 | LOC_Os03g29680 | Os03g0410300 | - | Detail |
| CX3g028649 | 3:15,391,579-15,394,437 | - | C1H3g03774 | C2H3g16726 | LOC_Os03g29730 | Os03g0410700 | - | Detail |
| CX3g029764 | 3:15,394,688-15,396,811 | + | C1H3g16818 | C2H3g26637 | LOC_Os03g29740 | Os03g0410900 | - | Detail |
| CX3g026328 | 3:15,403,611-15,409,222 | + | C1H3g23163 | C2H3g25819 | LOC_Os03g29750 | Os03g0411000 | - | Detail |
| CX3g029428 | 3:15,421,531-15,424,907 | + | C1H3g09595 | C2H3g03408 | LOC_Os03g29760 | Os03g0411100 | - | Detail |
| CX3g027514 | 3:15,427,361-15,427,840 | - | - | - | LOC_Os03g29770 | Os03g0411300 | - | Detail |