| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g29411 | 6:7,864,739-7,866,838 | + | C1H6g22454 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C2H6g08784 | 6:7,871,922-7,873,753 | + | C1H6g18150 | CX6g042085 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C2H6g23301 | 6:7,884,256-7,892,276 | + | C1H6g11842 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C2H6g18739 | 6:7,894,575-7,896,559 | - | C1H6g22322 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C2H6g26801 | 6:7,902,080-7,903,897 | + | C1H6g28161 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C2H6g08900 | 6:7,906,068-7,906,865 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g26383 | 6:7,907,925-7,908,182 | - | C1H6g25706 | - | - | - | - | Detail |
| C2H6g04388 | 6:7,918,732-7,927,129 | + | C1H6g22180 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C2H6g05369 | 6:7,928,735-7,942,153 | + | C1H6g11424 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C2H6g15127 | 6:7,942,274-7,947,309 | - | C1H6g04853 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C2H6g23432 | 6:7,966,579-7,969,484 | + | C1H6g01958 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C2H6g19168 | 6:7,971,257-7,978,687 | + | C1H6g15789 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C2H6g18561 | 6:7,996,540-7,999,087 | - | C1H6g25163 | CX6g044986 | LOC_Os06g16480 | - | - | Detail |
| C2H6g19122 | 6:8,079,153-8,080,276 | - | - | - | - | - | - | Detail |
| C2H6g04931 | 6:8,084,494-8,085,057 | + | - | CX6g044232 | - | - | - | Detail |
| C2H6g13388 | 6:8,092,233-8,094,811 | - | C1H6g04878 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C2H6g03383 | 6:8,249,187-8,251,271 | - | C1H6g07720 | CX6g041915 | LOC_Os06g16960 | Os06g0281300 | - | Detail |
| C2H6g14158 | 6:8,254,913-8,270,740 | - | C1H6g18405 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C2H6g29390 | 6:8,271,561-8,271,848 | - | C1H6g06414 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| C2H6g13653 | 6:8,275,391-8,277,642 | - | C1H6g17072 | CX6g042800 | LOC_Os06g17000 | Os06g0281800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026877 | 3:15,211,770-15,215,340 | + | C1H3g31034 | C2H3g23059 | LOC_Os03g29340 | Os03g0406900 | OsMac4 | Detail |
| CX3g030450 | 3:15,214,980-15,222,829 | - | C1H3g30818 | C2H3g26359 | LOC_Os03g29350 | Os03g0407000 | - | Detail |
| CX3g026274 | 3:15,245,834-15,251,336 | - | C1H3g12617 | C2H3g08674 | - | Os03g0407400 | GS3 | Detail |
| CX3g026747 | 3:15,258,745-15,259,799 | - | - | - | - | - | - | Detail |
| CX3g025160 | 3:15,264,471-15,267,808 | - | C1H3g17471 | C2H3g00647 | LOC_Os03g29410 | Os03g0407900 | - | Detail |
| CX3g026944 | 3:15,290,557-15,290,997 | + | C1H2g00014 | - | LOC_Os03g29460 | Os03g0408300 | - | Detail |
| CX3g027064 | 3:15,298,388-15,303,219 | + | C1H3g10731 | C2H3g15951 | LOC_Os03g29470 | Os03g0408500 | - | Detail |
| CX3g025952 | 3:15,305,898-15,307,536 | - | C1H3g25797 | - | LOC_Os03g29480 | Os03g0408600 | NSP1, Os NSP1, NSP1 | Detail |
| CX3g029761 | 3:15,332,376-15,333,288 | - | C1H3g30334 | C2H3g24060 | LOC_Os03g29540 | Os03g0409100 | - | Detail |
| CX3g026777 | 3:15,337,295-15,341,542 | - | C1H3g31871 | C2H3g04400 | LOC_Os03g29570 | Os03g0409400 | - | Detail |
| CX3g031255 | 3:15,343,358-15,345,703 | + | C1H3g21807 | C2H3g25735 | LOC_Os03g29584 | - | - | Detail |
| CX3g026419 | 3:15,359,350-15,359,946 | - | C1H3g05344 | C2H3g22866 | - | Os03g0335100 | - | Detail |
| CX3g031178 | 3:15,360,644-15,363,953 | + | C1H3g12159 | C2H3g24065 | LOC_Os03g29630 | Os03g0410100 | - | Detail |
| CX3g028823 | 3:15,368,452-15,368,697 | + | - | - | - | - | - | Detail |
| CX3g026992 | 3:15,377,536-15,377,880 | - | C1H3g17148 | C2H3g24471 | LOC_Os03g29680 | Os03g0410300 | - | Detail |
| CX3g028649 | 3:15,391,579-15,394,437 | - | C1H3g03774 | C2H3g16726 | LOC_Os03g29730 | Os03g0410700 | - | Detail |
| CX3g029764 | 3:15,394,688-15,396,811 | + | C1H3g16818 | C2H3g26637 | LOC_Os03g29740 | Os03g0410900 | - | Detail |
| CX3g026328 | 3:15,403,611-15,409,222 | + | C1H3g23163 | C2H3g25819 | LOC_Os03g29750 | Os03g0411000 | - | Detail |
| CX3g029428 | 3:15,421,531-15,424,907 | + | C1H3g09595 | C2H3g03408 | LOC_Os03g29760 | Os03g0411100 | - | Detail |
| CX3g027514 | 3:15,427,361-15,427,840 | - | - | - | LOC_Os03g29770 | Os03g0411300 | - | Detail |