| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g07379 | 7:1,284,437-1,284,955 | + | C2H7g30099 | CX7g046883 | LOC_Os07g03690 | Os07g0128800 | - | Detail |
| C1H7g03279 | 7:1,291,717-1,292,223 | + | C2H7g02005 | CX7g046883 | LOC_Os07g03710 | Os07g0129200 | PR1A, OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP | Detail |
| C1H7g25003 | 7:1,303,236-1,305,696 | - | C2H7g21640 | CX7g049764 | LOC_Os07g03760 | - | - | Detail |
| C1H7g21106 | 7:1,333,451-1,339,476 | + | C2H7g07364 | CX7g047059 | LOC_Os07g03770 | Os07g0129700 | OSH15, Oskn3 | Detail |
| C1H7g23406 | 7:1,344,162-1,344,768 | - | C2H7g12349 | - | LOC_Os07g03780 | Os07g0129800 | - | Detail |
| C1H7g13341 | 7:1,348,098-1,350,020 | - | C2H7g17374 | - | LOC_Os07g03790 | Os07g0129900 | - | Detail |
| C1H7g01046 | 7:1,354,016-1,357,784 | + | C2H7g09208 | - | - | Os07g0130000 | - | Detail |
| C1H7g10554 | 7:1,358,011-1,360,053 | - | C2H7g28273 | - | LOC_Os07g03810 | Os07g0130100 | - | Detail |
| C1H7g13345 | 7:1,362,971-1,365,064 | - | C2H7g22634 | - | LOC_Os07g03820 | Os07g0130200 | - | Detail |
| C1H7g20486 | 7:1,366,531-1,369,170 | - | C2H7g04790 | - | LOC_Os07g03830 | Os07g0131375 | - | Detail |
| C1H7g13914 | 7:1,370,512-1,372,590 | - | C2H7g13157 | - | LOC_Os07g03840 | Os07g0130400 | - | Detail |
| C1H7g22179 | 7:1,373,843-1,374,382 | - | - | - | - | - | - | Detail |
| C1H7g21616 | 7:1,375,748-1,377,748 | - | C2H7g09954 | - | LOC_Os07g03890 | Os07g0262800 | - | Detail |
| C1H7g05952 | 7:1,379,335-1,381,323 | - | C2H7g14045 | - | LOC_Os07g03860 | Os07g0131375 | - | Detail |
| C1H7g30530 | 7:1,382,905-1,384,935 | - | C2H7g25684 | - | LOC_Os07g03870 | Os07g0130800 | - | Detail |
| C1H7g17964 | 7:1,383,025-1,383,546 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g19523 | 7:1,389,128-1,391,047 | - | - | - | - | - | - | Detail |
| C1H7g31707 | 7:1,391,236-1,396,119 | - | C2H7g19397 | - | LOC_Os07g03880 | Os07g0262800 | - | Detail |
| C1H7g19595 | 7:1,391,252-1,392,807 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g21406 | 7:1,396,162-1,403,733 | - | C2H7g17372 | - | LOC_Os07g03890 | Os07g0131375 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026877 | 3:15,211,770-15,215,340 | + | C1H3g31034 | C2H3g23059 | LOC_Os03g29340 | Os03g0406900 | OsMac4 | Detail |
| CX3g030450 | 3:15,214,980-15,222,829 | - | C1H3g30818 | C2H3g26359 | LOC_Os03g29350 | Os03g0407000 | - | Detail |
| CX3g026274 | 3:15,245,834-15,251,336 | - | C1H3g12617 | C2H3g08674 | - | Os03g0407400 | GS3 | Detail |
| CX3g026747 | 3:15,258,745-15,259,799 | - | - | - | - | - | - | Detail |
| CX3g025160 | 3:15,264,471-15,267,808 | - | C1H3g17471 | C2H3g00647 | LOC_Os03g29410 | Os03g0407900 | - | Detail |
| CX3g026944 | 3:15,290,557-15,290,997 | + | C1H2g00014 | - | LOC_Os03g29460 | Os03g0408300 | - | Detail |
| CX3g027064 | 3:15,298,388-15,303,219 | + | C1H3g10731 | C2H3g15951 | LOC_Os03g29470 | Os03g0408500 | - | Detail |
| CX3g025952 | 3:15,305,898-15,307,536 | - | C1H3g25797 | - | LOC_Os03g29480 | Os03g0408600 | NSP1, Os NSP1, NSP1 | Detail |
| CX3g029761 | 3:15,332,376-15,333,288 | - | C1H3g30334 | C2H3g24060 | LOC_Os03g29540 | Os03g0409100 | - | Detail |
| CX3g026777 | 3:15,337,295-15,341,542 | - | C1H3g31871 | C2H3g04400 | LOC_Os03g29570 | Os03g0409400 | - | Detail |
| CX3g031255 | 3:15,343,358-15,345,703 | + | C1H3g21807 | C2H3g25735 | LOC_Os03g29584 | - | - | Detail |
| CX3g026419 | 3:15,359,350-15,359,946 | - | C1H3g05344 | C2H3g22866 | - | Os03g0335100 | - | Detail |
| CX3g031178 | 3:15,360,644-15,363,953 | + | C1H3g12159 | C2H3g24065 | LOC_Os03g29630 | Os03g0410100 | - | Detail |
| CX3g028823 | 3:15,368,452-15,368,697 | + | - | - | - | - | - | Detail |
| CX3g026992 | 3:15,377,536-15,377,880 | - | C1H3g17148 | C2H3g24471 | LOC_Os03g29680 | Os03g0410300 | - | Detail |
| CX3g028649 | 3:15,391,579-15,394,437 | - | C1H3g03774 | C2H3g16726 | LOC_Os03g29730 | Os03g0410700 | - | Detail |
| CX3g029764 | 3:15,394,688-15,396,811 | + | C1H3g16818 | C2H3g26637 | LOC_Os03g29740 | Os03g0410900 | - | Detail |
| CX3g026328 | 3:15,403,611-15,409,222 | + | C1H3g23163 | C2H3g25819 | LOC_Os03g29750 | Os03g0411000 | - | Detail |
| CX3g029428 | 3:15,421,531-15,424,907 | + | C1H3g09595 | C2H3g03408 | LOC_Os03g29760 | Os03g0411100 | - | Detail |
| CX3g027514 | 3:15,427,361-15,427,840 | - | - | - | LOC_Os03g29770 | Os03g0411300 | - | Detail |