| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08342 | 4:26,860,455-26,862,858 | - | C1H4g17112 | CX4g032086 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| C2H4g00410 | 4:26,864,370-26,866,805 | - | C1H4g26505 | CX4g034073 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| C2H4g07040 | 4:26,868,130-26,870,303 | - | C1H4g26370 | CX4g032089 | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C2H4g12282 | 4:26,874,951-26,875,307 | - | C1H4g21072 | CX4g036268 | LOC_Os04g52590 | Os04g0616400 | - | Detail |
| C2H4g22401 | 4:26,878,289-26,886,635 | - | C1H4g31488 | CX4g036268 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C2H4g28668 | 4:26,888,339-26,896,966 | - | C1H4g29940 | CX4g036268 | LOC_Os04g52600 | Os04g0616500 | - | Detail |
| C2H4g26176 | 4:26,897,574-26,900,163 | - | C1H4g29940 | CX4g031595 | LOC_Os04g52614 | Os04g0616500 | - | Detail |
| C2H4g05269 | 4:26,904,505-26,910,856 | - | C1H4g10791 | CX4g036268 | LOC_Os04g52630 | Os04g0616600 | - | Detail |
| C2H4g09870 | 4:26,911,107-26,911,801 | - | C1H4g24234 | CX4g036268 | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C2H4g20899 | 4:26,913,346-26,921,722 | - | C1H4g29940 | CX4g036268 | LOC_Os04g52606 | Os04g0616600 | - | Detail |
| C2H4g04032 | 4:26,923,888-26,925,736 | + | C1H4g28831 | - | LOC_Os04g52650 | Os04g0616800 | - | Detail |
| C2H4g03706 | 4:26,930,573-26,930,965 | - | - | CX4g033769 | LOC_Os04g52670 | Os04g0617050 | - | Detail |
| C2H4g19976 | 4:26,936,812-26,937,096 | + | - | CX4g031883 | LOC_Os04g52684 | Os04g0617350 | - | Detail |
| C2H4g01536 | 4:26,944,623-26,949,955 | - | C1H4g27365 | CX4g036466 | LOC_Os04g52690 | Os04g0617600 | - | Detail |
| C2H4g04231 | 4:26,958,454-26,959,521 | - | C1H4g15358 | CX4g034356 | LOC_Os04g52700 | Os04g0617700 | - | Detail |
| C2H4g26522 | 4:26,967,888-26,971,634 | + | C1H4g09661 | CX4g031958 | LOC_Os04g52710 | Os04g0617800 | - | Detail |
| C2H4g04663 | 4:26,971,862-26,973,377 | - | C1H4g19784 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C2H4g20761 | 4:26,977,278-26,981,514 | + | C1H4g16144 | CX4g036359 | - | - | - | Detail |
| C2H4g14147 | 4:26,982,929-26,986,653 | + | C1H4g21738 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C2H4g28863 | 4:26,987,062-26,987,475 | - | - | CX4g031585 | LOC_Os04g52740 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004047 | 1:1,175,168-1,177,763 | - | C1H1g19697 | C2H1g15386 | LOC_Os01g03630 | Os01g0127000 | OsLPR3 | Detail |
| CX1g000607 | 1:1,187,222-1,189,567 | - | C1H1g19697 | C2H1g15386 | LOC_Os01g03630 | Os01g0127000 | OsLPR3 | Detail |
| CX1g000136 | 1:1,193,385-1,196,162 | - | C1H1g14698 | C2H1g06554 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| CX1g005762 | 1:1,201,615-1,205,416 | - | C1H1g30854 | C2H1g21958 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| CX1g003465 | 1:1,205,216-1,208,037 | + | C1H1g00412 | C2H1g24576 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| CX1g002042 | 1:1,209,502-1,210,188 | + | C1H1g25838 | C2H1g17865 | LOC_Os01g03720 | Os01g0127450 | - | Detail |
| CX1g005179 | 1:1,210,718-1,211,814 | + | C1H1g17663 | C2H1g02319 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| CX1g002886 | 1:1,212,718-1,213,284 | + | C1H1g11231 | C2H1g19770 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| CX1g006285 | 1:1,215,545-1,218,614 | + | C1H1g05668 | C2H1g03781 | LOC_Os01g03690 | Os01g0115500 | - | Detail |
| CX1g000778 | 1:1,222,670-1,223,032 | - | - | - | - | - | - | Detail |
| CX1g004218 | 1:1,226,221-1,231,285 | + | C1H1g08835 | C2H1g13836 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| CX1g002896 | 1:1,241,591-1,242,821 | - | C1H1g25654 | C2H1g25959 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| CX1g004405 | 1:1,254,914-1,256,433 | - | C1H1g31764 | C2H1g01385 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| CX1g004550 | 1:1,257,421-1,259,962 | + | C1H1g04042 | C2H1g18960 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| CX1g002239 | 1:1,260,568-1,262,777 | - | C1H1g30874 | C2H1g15883 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| CX1g006333 | 1:1,262,999-1,267,553 | - | C1H1g07436 | C2H1g19347 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| CX1g003593 | 1:1,272,777-1,273,109 | - | - | - | LOC_Os01g03810 | Os01g0128700 | - | Detail |
| CX1g003056 | 1:1,273,740-1,280,290 | + | C1H1g20521 | C2H1g18545 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| CX1g000911 | 1:1,287,622-1,287,804 | + | - | - | - | Os04g0162701 | - | Detail |
| CX1g002103 | 1:1,293,173-1,294,579 | + | C1H1g27481 | C2H1g10390 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |