| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23293 | 9:17,237,498-17,241,720 | - | C1H9g12508 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C2H9g12959 | 9:17,244,294-17,248,356 | + | C1H9g22775 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C2H9g15101 | 9:17,249,838-17,250,716 | + | - | - | - | - | - | Detail |
| C2H9g06843 | 9:17,263,090-17,263,671 | + | - | CX11g014678 | - | - | - | Detail |
| C2H9g00413 | 9:17,263,682-17,263,970 | + | - | - | - | - | - | Detail |
| C2H9g13075 | 9:17,315,214-17,317,637 | - | C1H9g22926 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C2H9g25776 | 9:17,325,847-17,329,040 | + | C1H9g31662 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C2H9g21918 | 9:17,329,621-17,332,264 | - | C1H9g25445 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C2H9g18090 | 9:17,332,743-17,333,235 | + | - | - | - | - | - | Detail |
| C2H9g16534 | 9:17,336,698-17,341,474 | - | C1H9g08911 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C2H9g00761 | 9:17,342,206-17,342,619 | + | C1H9g02024 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C2H9g16855 | 9:17,343,281-17,348,296 | - | C1H9g15317 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C2H9g29379 | 9:17,350,467-17,356,488 | - | C1H9g29308 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C2H9g07857 | 9:17,358,469-17,361,650 | - | C1H9g08625 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C2H9g18140 | 9:17,365,844-17,367,855 | + | C1H9g31758 | CX9g054877 | LOC_Os09g35740 | - | - | Detail |
| C2H9g08359 | 9:17,379,953-17,386,025 | - | C1H9g21556 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C2H9g23914 | 9:17,398,899-17,399,452 | - | C1H9g12923 | - | - | - | - | Detail |
| C2H9g25457 | 9:17,401,310-17,402,916 | - | C1H9g05187 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C2H9g28414 | 9:17,408,099-17,410,200 | - | C1H9g15216 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C2H9g05438 | 9:17,413,778-17,416,569 | - | C1H9g04329 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027792 | 3:14,491,428-14,494,962 | + | C1H3g05691 | C2H3g24749 | LOC_Os03g27960 | Os03g0397400 | OsCAX2 | Detail |
| CX3g028698 | 3:14,496,251-14,497,969 | + | C1H3g31188 | C2H3g02059 | LOC_Os03g27970 | Os03g0397500 | - | Detail |
| CX3g028753 | 3:14,501,016-14,502,545 | - | - | - | - | Os03g0792850 | - | Detail |
| CX3g027940 | 3:14,503,258-14,508,773 | - | C1H3g30234 | C2H3g25412 | LOC_Os03g27990 | Os03g0397700 | - | Detail |
| CX3g028185 | 3:14,535,306-14,535,770 | + | C1H3g07849 | C2H3g29084 | LOC_Os03g28040 | Os03g0398250 | - | Detail |
| CX3g031157 | 3:14,547,428-14,552,313 | + | C1H3g07849 | C2H3g14933 | LOC_Os03g28080 | Os03g0398600 | - | Detail |
| CX3g029927 | 3:14,564,291-14,566,191 | + | C1H3g01123 | C2H3g06314 | LOC_Os03g28090 | Os03g0399000 | - | Detail |
| CX3g026101 | 3:14,575,173-14,576,547 | - | - | - | - | - | - | Detail |
| CX3g030514 | 3:14,590,692-14,601,731 | - | C1H3g20083 | C2H3g10150 | LOC_Os03g28140 | Os03g0399532 | - | Detail |
| CX3g030943 | 3:14,608,563-14,608,739 | - | - | - | - | - | - | Detail |
| CX3g029800 | 3:14,609,270-14,609,851 | + | C1H3g15734 | C2H3g20990 | LOC_Os03g28160 | Os03g0399800 | - | Detail |
| CX3g028937 | 3:14,614,569-14,615,437 | + | C1H3g27218 | C2H3g13601 | LOC_Os03g28170 | Os03g0399800 | - | Detail |
| CX3g029472 | 3:14,627,331-14,628,258 | + | - | - | LOC_Os03g28060 | Os11g0256400 | - | Detail |
| CX3g028597 | 3:14,629,554-14,630,166 | - | - | - | LOC_Os04g17200 | Os03g0274400 | - | Detail |
| CX3g031076 | 3:14,630,691-14,630,873 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g025583 | 3:14,640,378-14,640,917 | - | C1H3g01230 | C2H3g25262 | LOC_Os03g28190 | Os03g0400200 | - | Detail |
| CX3g029332 | 3:14,644,269-14,644,572 | - | - | - | - | - | - | Detail |
| CX3g029785 | 3:14,648,231-14,648,473 | - | C1H3g12790 | C2H3g09978 | LOC_Os03g28260 | Os03g0400700 | - | Detail |
| CX3g030075 | 3:14,655,037-14,659,869 | - | C1H3g18690 | C2H3g09323 | LOC_Os03g28270 | Os03g0350300 | - | Detail |
| CX3g027787 | 3:14,668,731-14,670,547 | - | C1H3g22351 | C2H3g27980 | LOC_Os03g28270 | Os03g0400901 | - | Detail |