| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28105 | 5:24,111,796-24,112,707 | - | C1H5g30015 | CX5g037651 | LOC_Os05g50160 | Os05g0577100 | - | Detail |
| C2H5g16560 | 5:24,119,207-24,123,823 | - | C1H5g15586 | CX5g040119 | LOC_Os05g50170 | Os05g0577200 | - | Detail |
| C2H5g18251 | 5:24,125,998-24,126,519 | - | C1H5g18973 | CX5g040982 | LOC_Os05g50180 | Os05g0577500 | - | Detail |
| C2H5g07752 | 5:24,128,176-24,141,377 | - | C1H5g14939 | CX5g037985 | LOC_Os05g50200 | Os05g0577800 | - | Detail |
| C2H5g09946 | 5:24,142,380-24,146,743 | - | C1H5g25502 | CX5g040371 | LOC_Os05g50210 | Os05g0577900 | - | Detail |
| C2H5g10460 | 5:24,147,354-24,149,591 | + | C1H5g03913 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C2H5g03748 | 5:24,153,325-24,154,242 | - | C1H5g20150 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C2H5g13618 | 5:24,162,476-24,167,600 | + | C1H5g22642 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g26536 | 5:24,167,680-24,168,015 | + | C1H5g05740 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g20774 | 5:24,169,397-24,170,344 | - | C1H5g30673 | CX5g039172 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g28332 | 5:24,174,131-24,177,534 | - | C1H5g30673 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g01414 | 5:24,178,489-24,179,683 | + | C1H5g18644 | CX5g038128 | - | - | - | Detail |
| C2H5g06442 | 5:24,180,855-24,181,193 | + | - | - | - | - | - | Detail |
| C2H5g24268 | 5:24,188,936-24,189,860 | + | C1H5g30824 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C2H5g28493 | 5:24,190,618-24,195,475 | - | C1H5g28939 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C2H5g09709 | 5:24,202,249-24,203,250 | + | C1H5g17437 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C2H5g24355 | 5:24,205,657-24,207,606 | + | C1H5g00625 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C2H5g30078 | 5:24,210,212-24,210,937 | + | C1H5g28773 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C2H5g20837 | 5:24,220,960-24,221,858 | - | C1H8g13275 | CX5g038520 | - | - | - | Detail |
| C2H5g16972 | 5:24,223,244-24,223,831 | - | C1H5g25217 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027792 | 3:14,491,428-14,494,962 | + | C1H3g05691 | C2H3g24749 | LOC_Os03g27960 | Os03g0397400 | OsCAX2 | Detail |
| CX3g028698 | 3:14,496,251-14,497,969 | + | C1H3g31188 | C2H3g02059 | LOC_Os03g27970 | Os03g0397500 | - | Detail |
| CX3g028753 | 3:14,501,016-14,502,545 | - | - | - | - | Os03g0792850 | - | Detail |
| CX3g027940 | 3:14,503,258-14,508,773 | - | C1H3g30234 | C2H3g25412 | LOC_Os03g27990 | Os03g0397700 | - | Detail |
| CX3g028185 | 3:14,535,306-14,535,770 | + | C1H3g07849 | C2H3g29084 | LOC_Os03g28040 | Os03g0398250 | - | Detail |
| CX3g031157 | 3:14,547,428-14,552,313 | + | C1H3g07849 | C2H3g14933 | LOC_Os03g28080 | Os03g0398600 | - | Detail |
| CX3g029927 | 3:14,564,291-14,566,191 | + | C1H3g01123 | C2H3g06314 | LOC_Os03g28090 | Os03g0399000 | - | Detail |
| CX3g026101 | 3:14,575,173-14,576,547 | - | - | - | - | - | - | Detail |
| CX3g030514 | 3:14,590,692-14,601,731 | - | C1H3g20083 | C2H3g10150 | LOC_Os03g28140 | Os03g0399532 | - | Detail |
| CX3g030943 | 3:14,608,563-14,608,739 | - | - | - | - | - | - | Detail |
| CX3g029800 | 3:14,609,270-14,609,851 | + | C1H3g15734 | C2H3g20990 | LOC_Os03g28160 | Os03g0399800 | - | Detail |
| CX3g028937 | 3:14,614,569-14,615,437 | + | C1H3g27218 | C2H3g13601 | LOC_Os03g28170 | Os03g0399800 | - | Detail |
| CX3g029472 | 3:14,627,331-14,628,258 | + | - | - | LOC_Os03g28060 | Os11g0256400 | - | Detail |
| CX3g028597 | 3:14,629,554-14,630,166 | - | - | - | LOC_Os04g17200 | Os03g0274400 | - | Detail |
| CX3g031076 | 3:14,630,691-14,630,873 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g025583 | 3:14,640,378-14,640,917 | - | C1H3g01230 | C2H3g25262 | LOC_Os03g28190 | Os03g0400200 | - | Detail |
| CX3g029332 | 3:14,644,269-14,644,572 | - | - | - | - | - | - | Detail |
| CX3g029785 | 3:14,648,231-14,648,473 | - | C1H3g12790 | C2H3g09978 | LOC_Os03g28260 | Os03g0400700 | - | Detail |
| CX3g030075 | 3:14,655,037-14,659,869 | - | C1H3g18690 | C2H3g09323 | LOC_Os03g28270 | Os03g0350300 | - | Detail |
| CX3g027787 | 3:14,668,731-14,670,547 | - | C1H3g22351 | C2H3g27980 | LOC_Os03g28270 | Os03g0400901 | - | Detail |