| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g07348 | 10:18,407,059-18,412,223 | + | C1H10g11481 | CX10g008144 | LOC_Os10g37690 | Os10g0521300 | - | Detail |
| C2H10g21194 | 10:18,417,400-18,419,393 | + | C1H10g29636 | CX10g007385 | LOC_Os10g37710 | Os10g0521400 | - | Detail |
| C2H10g04143 | 10:18,422,320-18,425,301 | + | C1H10g07827 | CX10g008250 | LOC_Os10g37720 | Os10g0521500 | - | Detail |
| C2H10g00084 | 10:18,425,392-18,429,692 | - | C1H10g05559 | CX10g007715 | LOC_Os10g37730 | Os10g0521600 | - | Detail |
| C2H10g11415 | 10:18,433,971-18,438,326 | - | C1H10g03666 | CX10g009291 | LOC_Os10g37740 | Os10g0521700 | OsSK31 | Detail |
| C2H10g02657 | 10:18,444,225-18,446,417 | + | C1H10g12377 | CX10g009669 | LOC_Os10g37760 | Os10g0521900 | - | Detail |
| C2H10g04301 | 10:18,447,458-18,450,834 | - | C1H10g06785 | CX10g007522 | LOC_Os10g36690 | Os10g0522000 | - | Detail |
| C2H10g13672 | 10:18,471,192-18,473,104 | + | C1H10g04291 | CX10g009869 | LOC_Os10g37830 | Os10g0522400 | - | Detail |
| C2H10g21199 | 10:18,476,605-18,479,665 | + | C1H10g08299 | CX10g008581 | LOC_Os10g37840 | Os10g0522500 | - | Detail |
| C2H10g02412 | 10:18,482,998-18,486,894 | + | C1H10g04858 | CX10g008362 | LOC_Os10g37850 | Os10g0522601 | GS10 | Detail |
| C2H10g25321 | 10:18,492,647-18,492,832 | - | - | - | LOC_Os10g37860 | Os10g0522700 | - | Detail |
| C2H10g09120 | 10:18,499,308-18,499,499 | - | - | - | LOC_Os10g37870 | Os10g0522800 | - | Detail |
| C2H10g03505 | 10:18,503,094-18,505,768 | + | C1H10g04537 | CX10g009047 | LOC_Os10g37880 | Os10g0522900 | - | Detail |
| C2H10g23203 | 10:18,508,427-18,513,034 | + | C1H10g22375 | CX10g009047 | LOC_Os10g37899 | Os10g0523100 | - | Detail |
| C2H10g25117 | 10:18,513,494-18,517,696 | + | C1H10g15305 | CX10g009047 | LOC_Os10g37899 | Os10g0523100 | - | Detail |
| C2H10g20128 | 10:18,525,347-18,526,975 | + | C1H10g05591 | CX10g007545 | LOC_Os10g37920 | Os10g0345100 | - | Detail |
| C2H10g09896 | 10:18,548,725-18,549,960 | - | - | - | LOC_Os10g37980 | Os10g0523700 | - | Detail |
| C2H10g09357 | 10:18,560,629-18,561,219 | + | C1H10g20432 | CX10g008810 | LOC_Os10g38000 | Os10g0523900 | - | Detail |
| C2H10g09653 | 10:18,561,994-18,564,184 | + | - | CX10g008810 | - | - | - | Detail |
| C2H10g09321 | 10:18,568,543-18,572,484 | + | C1H10g20918 | CX10g009978 | LOC_Os10g38020 | Os10g0524000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030588 | 3:14,223,635-14,228,298 | - | - | C2H2g02575 | - | - | - | Detail |
| CX3g027706 | 3:14,275,134-14,279,722 | - | C1H3g26998 | C2H3g03469 | LOC_Os03g27550 | Os03g0393700 | - | Detail |
| CX3g026110 | 3:14,287,232-14,288,749 | + | C1H3g17152 | C2H3g01147 | LOC_Os03g27610 | Os03g0393900 | OsMATL, OspPLAIIφ, OspPLAIIphi, OsPLP1, PLP1, OspPLAIIbeta | Detail |
| CX3g027508 | 3:14,304,354-14,304,503 | + | - | - | - | - | - | Detail |
| CX3g028968 | 3:14,344,669-14,344,821 | + | - | - | - | - | - | Detail |
| CX3g031126 | 3:14,345,332-14,346,150 | - | - | - | - | - | - | Detail |
| CX3g026596 | 3:14,346,342-14,346,575 | + | C1H6g31651 | C2H6g01158 | LOC_Os03g27750 | - | - | Detail |
| CX3g027952 | 3:14,349,067-14,352,631 | - | C1H3g03234 | C2H3g26978 | LOC_Os03g27760 | Os03g0394900 | - | Detail |
| CX3g030447 | 3:14,366,825-14,369,591 | - | C1H3g11733 | C2H3g09617 | LOC_Os03g27770 | Os03g0395000 | - | Detail |
| CX3g028476 | 3:14,374,691-14,377,867 | + | C1H3g19183 | C2H3g01443 | LOC_Os03g27780 | Os03g0395100 | - | Detail |
| CX3g026022 | 3:14,379,004-14,379,285 | - | - | - | LOC_Os03g27790 | Os03g0395200 | - | Detail |
| CX3g030371 | 3:14,381,867-14,384,422 | - | C1H3g08236 | C2H3g18166 | LOC_Os03g27800 | Os03g0395300 | - | Detail |
| CX3g026141 | 3:14,393,740-14,403,019 | + | C1H3g01799 | C2H3g07826 | LOC_Os03g27820 | Os03g0395600 | - | Detail |
| CX3g026363 | 3:14,423,787-14,429,794 | + | C1H3g28884 | C2H3g08215 | LOC_Os03g27840 | Os03g0395900 | - | Detail |
| CX3g027578 | 3:14,437,488-14,438,663 | + | C1H3g01530 | C2H3g19865 | LOC_Os03g27850 | Os03g0396000 | - | Detail |
| CX3g027489 | 3:14,444,731-14,446,980 | - | C1H3g13556 | C2H3g17418 | LOC_Os03g27880 | Os03g0396200 | - | Detail |
| CX3g030978 | 3:14,452,381-14,453,077 | - | C1H3g24344 | C2H3g02671 | LOC_Os03g27900 | Os03g0396500 | - | Detail |
| CX3g028903 | 3:14,466,555-14,472,459 | + | C1H3g22022 | C2H3g12892 | LOC_Os03g27930 | Os03g0396900 | - | Detail |
| CX3g026417 | 3:14,475,307-14,475,885 | + | C1H3g00858 | C2H3g11199 | - | - | - | Detail |
| CX3g031110 | 3:14,476,661-14,487,887 | + | C1H3g12738 | C2H3g14980 | LOC_Os03g27950 | Os03g0397300 | - | Detail |