| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g09742 | 12:20,852,487-20,854,463 | - | C2H12g17755 | CX9g054933 | LOC_Os12g41220 | Os12g0605400 | OsUEV1B | Detail |
| C1H12g12734 | 12:20,855,054-20,862,410 | - | C2H12g09059 | CX12g017137 | LOC_Os12g41230 | Os12g0605500 | - | Detail |
| C1H12g31534 | 12:20,865,641-20,871,206 | + | C2H12g19406 | CX12g018485 | LOC_Os12g41250 | Os12g0605800 | - | Detail |
| C1H12g16071 | 12:20,872,529-20,875,240 | + | C2H12g23124 | CX12g016368 | LOC_Os12g41260 | Os12g0605900 | - | Detail |
| C1H12g02059 | 12:20,879,101-20,880,289 | + | C2H12g22857 | CX12g016705 | LOC_Os12g41270 | Os12g0606000 | - | Detail |
| C1H12g19501 | 12:20,881,353-20,882,845 | + | C2H12g11354 | CX12g017225 | LOC_Os12g41270 | Os12g0606000 | - | Detail |
| C1H12g31837 | 12:20,885,263-20,891,508 | + | C2H12g23681 | CX12g017613 | LOC_Os12g41290 | Os12g0606100 | - | Detail |
| C1H12g09199 | 12:20,909,990-20,915,597 | + | C2H12g22210 | CX12g018443 | LOC_Os12g41380 | Os12g0606900 | OsOTS2 | Detail |
| C1H12g12545 | 12:20,920,579-20,924,064 | + | C2H12g18070 | CX12g018107 | LOC_Os12g41390 | Os12g0607000 | - | Detail |
| C1H12g00650 | 12:20,925,988-20,930,634 | + | C2H12g17327 | CX12g015133 | LOC_Os12g41400 | Os12g0607100 | - | Detail |
| C1H12g03455 | 12:20,938,507-20,939,859 | - | C2H12g20850 | CX12g016010 | LOC_Os12g41450 | Os12g0607800 | - | Detail |
| C1H12g04073 | 12:20,941,500-20,942,900 | - | C2H12g03575 | CX12g015736 | LOC_Os12g41450 | Os12g0607800 | - | Detail |
| C1H12g00220 | 12:20,960,832-20,962,910 | + | C2H12g11981 | CX12g016306 | LOC_Os12g41490 | Os12g0608500 | - | Detail |
| C1H12g09484 | 12:20,963,070-20,968,020 | - | C2H12g30093 | CX12g018323 | LOC_Os12g41500 | Os12g0608600 | STR22, OsStr22 | Detail |
| C1H12g01168 | 12:20,969,581-20,970,642 | - | C2H12g09553 | CX12g015250 | LOC_Os12g41510 | Os12g0608500 | - | Detail |
| C1H12g03128 | 12:20,981,593-20,983,641 | - | C2H12g05385 | CX12g017920 | LOC_Os12g41530 | Os12g0608900 | - | Detail |
| C1H12g26922 | 12:20,985,084-20,986,854 | - | C2H12g13512 | CX12g018003 | LOC_Os12g41540 | Os12g0609000 | - | Detail |
| C1H12g29137 | 12:20,989,300-20,989,922 | + | - | - | LOC_Os12g41560 | Os12g0609200 | - | Detail |
| C1H12g21344 | 12:20,990,636-20,991,616 | - | C2H12g10087 | CX12g018134 | LOC_Os12g41570 | Os12g0595800 | OsWAKL21.2 | Detail |
| C1H12g10014 | 12:20,994,488-20,996,602 | - | C2H12g13512 | CX12g017225 | LOC_Os12g41540 | Os12g0608900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030588 | 3:14,223,635-14,228,298 | - | - | C2H2g02575 | - | - | - | Detail |
| CX3g027706 | 3:14,275,134-14,279,722 | - | C1H3g26998 | C2H3g03469 | LOC_Os03g27550 | Os03g0393700 | - | Detail |
| CX3g026110 | 3:14,287,232-14,288,749 | + | C1H3g17152 | C2H3g01147 | LOC_Os03g27610 | Os03g0393900 | OsMATL, OspPLAIIφ, OspPLAIIphi, OsPLP1, PLP1, OspPLAIIbeta | Detail |
| CX3g027508 | 3:14,304,354-14,304,503 | + | - | - | - | - | - | Detail |
| CX3g028968 | 3:14,344,669-14,344,821 | + | - | - | - | - | - | Detail |
| CX3g031126 | 3:14,345,332-14,346,150 | - | - | - | - | - | - | Detail |
| CX3g026596 | 3:14,346,342-14,346,575 | + | C1H6g31651 | C2H6g01158 | LOC_Os03g27750 | - | - | Detail |
| CX3g027952 | 3:14,349,067-14,352,631 | - | C1H3g03234 | C2H3g26978 | LOC_Os03g27760 | Os03g0394900 | - | Detail |
| CX3g030447 | 3:14,366,825-14,369,591 | - | C1H3g11733 | C2H3g09617 | LOC_Os03g27770 | Os03g0395000 | - | Detail |
| CX3g028476 | 3:14,374,691-14,377,867 | + | C1H3g19183 | C2H3g01443 | LOC_Os03g27780 | Os03g0395100 | - | Detail |
| CX3g026022 | 3:14,379,004-14,379,285 | - | - | - | LOC_Os03g27790 | Os03g0395200 | - | Detail |
| CX3g030371 | 3:14,381,867-14,384,422 | - | C1H3g08236 | C2H3g18166 | LOC_Os03g27800 | Os03g0395300 | - | Detail |
| CX3g026141 | 3:14,393,740-14,403,019 | + | C1H3g01799 | C2H3g07826 | LOC_Os03g27820 | Os03g0395600 | - | Detail |
| CX3g026363 | 3:14,423,787-14,429,794 | + | C1H3g28884 | C2H3g08215 | LOC_Os03g27840 | Os03g0395900 | - | Detail |
| CX3g027578 | 3:14,437,488-14,438,663 | + | C1H3g01530 | C2H3g19865 | LOC_Os03g27850 | Os03g0396000 | - | Detail |
| CX3g027489 | 3:14,444,731-14,446,980 | - | C1H3g13556 | C2H3g17418 | LOC_Os03g27880 | Os03g0396200 | - | Detail |
| CX3g030978 | 3:14,452,381-14,453,077 | - | C1H3g24344 | C2H3g02671 | LOC_Os03g27900 | Os03g0396500 | - | Detail |
| CX3g028903 | 3:14,466,555-14,472,459 | + | C1H3g22022 | C2H3g12892 | LOC_Os03g27930 | Os03g0396900 | - | Detail |
| CX3g026417 | 3:14,475,307-14,475,885 | + | C1H3g00858 | C2H3g11199 | - | - | - | Detail |
| CX3g031110 | 3:14,476,661-14,487,887 | + | C1H3g12738 | C2H3g14980 | LOC_Os03g27950 | Os03g0397300 | - | Detail |