| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g00038 | 8:20,488,062-20,489,015 | - | C2H8g14902 | CX8g053516 | LOC_Os08g37345 | Os08g0478466 | - | Detail |
| C1H8g07439 | 8:20,492,143-20,493,709 | + | C2H8g13560 | CX8g052511 | - | - | - | Detail |
| C1H8g14353 | 8:20,498,401-20,505,851 | - | C2H8g14922 | CX8g054195 | LOC_Os08g37350 | Os08g0478500 | - | Detail |
| C1H8g21060 | 8:20,526,101-20,531,757 | - | C2H8g10223 | CX8g051387 | LOC_Os08g37380 | Os08g0478800 | - | Detail |
| C1H8g24275 | 8:20,548,619-20,550,972 | + | C2H8g27062 | CX8g052491 | LOC_Os08g37390 | Os08g0479300 | - | Detail |
| C1H8g13479 | 8:20,597,078-20,597,562 | + | C2H8g07236 | - | - | - | - | Detail |
| C1H8g07368 | 8:20,599,609-20,604,537 | + | C2H8g02187 | CX8g054368 | LOC_Os08g37432 | Os08g0480000 | - | Detail |
| C1H8g08337 | 8:20,604,978-20,609,574 | - | C2H8g16239 | CX8g051529 | LOC_Os08g37444 | Os08g0480100 | - | Detail |
| C1H8g11569 | 8:20,611,048-20,612,913 | - | C2H8g07875 | CX8g051751 | LOC_Os08g37456 | Os08g0480200 | - | Detail |
| C1H8g10824 | 8:20,618,266-20,619,761 | - | C2H8g16349 | CX8g052667 | LOC_Os08g37470 | Os08g0480400 | - | Detail |
| C1H8g07548 | 8:20,631,257-20,633,204 | - | C2H8g25194 | CX8g051045 | LOC_Os08g37480 | Os08g0480500 | - | Detail |
| C1H8g02822 | 8:20,635,693-20,637,923 | + | C2H8g30037 | CX8g051962 | LOC_Os08g37490 | Os08g0480800 | - | Detail |
| C1H8g14557 | 8:20,642,301-20,644,333 | + | C2H8g08023 | CX8g054049 | LOC_Os08g37500 | Os08g0481100 | - | Detail |
| C1H8g18859 | 8:20,645,467-20,647,731 | - | C2H8g29374 | CX8g052069 | LOC_Os08g37520 | Os08g0481000 | - | Detail |
| C1H8g20776 | 8:20,649,979-20,652,379 | - | C2H8g08557 | CX8g050655 | LOC_Os08g37570 | Os08g0481200 | - | Detail |
| C1H8g18729 | 8:20,662,332-20,664,055 | - | C2H8g04351 | CX8g053322 | LOC_Os08g37580 | Os08g0481400 | - | Detail |
| C1H8g30578 | 8:20,673,106-20,673,522 | + | C2H8g16610 | - | - | - | - | Detail |
| C1H8g11865 | 8:20,674,634-20,679,418 | - | C2H8g30027 | CX8g051877 | LOC_Os08g37600 | Os08g0481800 | - | Detail |
| C1H8g01806 | 8:20,681,664-20,682,336 | - | C2H8g21498 | - | - | - | - | Detail |
| C1H8g14517 | 8:20,682,696-20,686,674 | + | C2H8g30159 | CX8g051178 | LOC_Os08g37605 | Os08g0481950 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030588 | 3:14,223,635-14,228,298 | - | - | C2H2g02575 | - | - | - | Detail |
| CX3g027706 | 3:14,275,134-14,279,722 | - | C1H3g26998 | C2H3g03469 | LOC_Os03g27550 | Os03g0393700 | - | Detail |
| CX3g026110 | 3:14,287,232-14,288,749 | + | C1H3g17152 | C2H3g01147 | LOC_Os03g27610 | Os03g0393900 | OsMATL, OspPLAIIφ, OspPLAIIphi, OsPLP1, PLP1, OspPLAIIbeta | Detail |
| CX3g027508 | 3:14,304,354-14,304,503 | + | - | - | - | - | - | Detail |
| CX3g028968 | 3:14,344,669-14,344,821 | + | - | - | - | - | - | Detail |
| CX3g031126 | 3:14,345,332-14,346,150 | - | - | - | - | - | - | Detail |
| CX3g026596 | 3:14,346,342-14,346,575 | + | C1H6g31651 | C2H6g01158 | LOC_Os03g27750 | - | - | Detail |
| CX3g027952 | 3:14,349,067-14,352,631 | - | C1H3g03234 | C2H3g26978 | LOC_Os03g27760 | Os03g0394900 | - | Detail |
| CX3g030447 | 3:14,366,825-14,369,591 | - | C1H3g11733 | C2H3g09617 | LOC_Os03g27770 | Os03g0395000 | - | Detail |
| CX3g028476 | 3:14,374,691-14,377,867 | + | C1H3g19183 | C2H3g01443 | LOC_Os03g27780 | Os03g0395100 | - | Detail |
| CX3g026022 | 3:14,379,004-14,379,285 | - | - | - | LOC_Os03g27790 | Os03g0395200 | - | Detail |
| CX3g030371 | 3:14,381,867-14,384,422 | - | C1H3g08236 | C2H3g18166 | LOC_Os03g27800 | Os03g0395300 | - | Detail |
| CX3g026141 | 3:14,393,740-14,403,019 | + | C1H3g01799 | C2H3g07826 | LOC_Os03g27820 | Os03g0395600 | - | Detail |
| CX3g026363 | 3:14,423,787-14,429,794 | + | C1H3g28884 | C2H3g08215 | LOC_Os03g27840 | Os03g0395900 | - | Detail |
| CX3g027578 | 3:14,437,488-14,438,663 | + | C1H3g01530 | C2H3g19865 | LOC_Os03g27850 | Os03g0396000 | - | Detail |
| CX3g027489 | 3:14,444,731-14,446,980 | - | C1H3g13556 | C2H3g17418 | LOC_Os03g27880 | Os03g0396200 | - | Detail |
| CX3g030978 | 3:14,452,381-14,453,077 | - | C1H3g24344 | C2H3g02671 | LOC_Os03g27900 | Os03g0396500 | - | Detail |
| CX3g028903 | 3:14,466,555-14,472,459 | + | C1H3g22022 | C2H3g12892 | LOC_Os03g27930 | Os03g0396900 | - | Detail |
| CX3g026417 | 3:14,475,307-14,475,885 | + | C1H3g00858 | C2H3g11199 | - | - | - | Detail |
| CX3g031110 | 3:14,476,661-14,487,887 | + | C1H3g12738 | C2H3g14980 | LOC_Os03g27950 | Os03g0397300 | - | Detail |