| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18501 | 2:19,164,380-19,165,406 | - | C1H2g27793 | CX2g022789 | LOC_Os02g33790 | - | - | Detail |
| C2H2g01260 | 2:19,165,423-19,165,857 | - | C1H2g08622 | - | - | - | - | Detail |
| C2H2g07033 | 2:19,172,363-19,172,898 | - | C1H2g21560 | CX2g019174 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| C2H2g22437 | 2:19,175,500-19,178,856 | - | C1H2g07478 | CX2g020648 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| C2H2g26343 | 2:19,188,625-19,192,497 | + | C1H2g21330 | CX2g023537 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| C2H2g00010 | 2:19,210,530-19,213,037 | - | C1H2g10313 | CX2g020736 | LOC_Os02g33890 | Os02g0297200 | - | Detail |
| C2H2g15474 | 2:19,270,010-19,275,300 | - | - | - | - | - | - | Detail |
| C2H2g13315 | 2:19,313,391-19,315,782 | - | C1H11g14205 | CX11g014480 | LOC_Os11g43404 | - | - | Detail |
| C2H2g17047 | 2:19,317,086-19,317,352 | + | C1H1g25728 | - | - | Os03g0578300 | - | Detail |
| C2H2g01626 | 2:19,385,469-19,407,701 | + | C1H2g27639 | CX2g024825 | LOC_Os03g64290 | Os02g0545000 | - | Detail |
| C2H2g18126 | 2:19,448,579-19,448,917 | + | C1H2g31615 | CX2g023067 | - | - | - | Detail |
| C2H2g08974 | 2:19,452,277-19,453,420 | + | - | - | - | Os02g0546400 | - | Detail |
| C2H2g03353 | 2:19,454,809-19,455,564 | - | C1H2g27118 | CX2g021266 | LOC_Os02g34260 | Os02g0546600 | - | Detail |
| C2H2g28913 | 2:19,483,392-19,485,886 | + | C1H2g07807 | CX2g021833 | LOC_Os02g34320 | - | - | Detail |
| C2H2g23048 | 2:19,496,791-19,499,312 | + | C1H2g25374 | CX2g022612 | LOC_Os02g34370 | Os02g0548100 | - | Detail |
| C2H2g01870 | 2:19,500,390-19,501,638 | + | C1H2g22824 | CX2g024786 | - | - | - | Detail |
| C2H2g11085 | 2:19,550,517-19,554,041 | + | C1H2g19067 | CX2g022202 | LOC_Os02g34430 | Os02g0549200 | - | Detail |
| C2H2g12630 | 2:19,560,433-19,562,262 | - | C1H2g22829 | - | - | Os02g0549401 | - | Detail |
| C2H2g30100 | 2:19,567,302-19,569,544 | + | C1H2g16065 | CX2g020503 | LOC_Os02g34460 | Os02g0549600 | - | Detail |
| C2H2g10553 | 2:19,579,625-19,586,051 | + | C1H2g11806 | CX2g019946 | LOC_Os02g34490 | Os02g0549900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025732 | 3:14,001,539-14,005,584 | + | C1H3g20114 | C2H3g24243 | LOC_Os03g27230 | Os03g0389700 | OsDAHPS1, DAHPS1 | Detail |
| CX3g028319 | 3:14,010,964-14,018,063 | + | C1H3g30971 | C2H3g12972 | LOC_Os03g27250 | Os03g0389900 | - | Detail |
| CX3g027960 | 3:14,019,414-14,021,460 | - | C1H3g19742 | C2H3g06738 | LOC_Os03g27260 | Os03g0390000 | - | Detail |
| CX3g031288 | 3:14,025,481-14,029,298 | - | C1H3g17252 | C2H3g21967 | LOC_Os03g27280 | Os03g0390200 | - | Detail |
| CX3g029813 | 3:14,048,617-14,050,327 | + | C1H3g08377 | C2H3g10154 | LOC_Os03g27290 | Os03g0390400 | - | Detail |
| CX3g025879 | 3:14,054,529-14,055,211 | + | C1H3g03476 | C2H3g16150 | LOC_Os03g27310 | Os03g0390600 | - | Detail |
| CX3g025932 | 3:14,056,208-14,059,192 | + | C1H3g30084 | C2H3g25165 | LOC_Os03g27320 | Os03g0390700 | OsTTL | Detail |
| CX3g027950 | 3:14,061,901-14,064,846 | + | C1H3g29350 | C2H3g02856 | LOC_Os03g27350 | Os03g0391000 | - | Detail |
| CX3g026532 | 3:14,068,825-14,070,048 | + | C1H3g09929 | C2H3g17457 | LOC_Os03g27360 | Os03g0391100 | - | Detail |
| CX3g028456 | 3:14,075,627-14,080,400 | + | C1H3g16806 | C2H3g06527 | LOC_Os03g27370 | Os03g0391400 | OsPLDα6, OsPLDalpha6 | Detail |
| CX3g030612 | 3:14,090,180-14,090,341 | + | - | - | - | - | - | Detail |
| CX3g028215 | 3:14,092,555-14,093,487 | - | C1H3g30949 | C2H3g10546 | LOC_Os03g27390 | Os03g0391700 | OsbHLH138 | Detail |
| CX3g028568 | 3:14,106,024-14,106,304 | - | - | - | - | - | - | Detail |
| CX3g030816 | 3:14,130,251-14,132,229 | - | C1H3g13034 | C2H3g23808 | LOC_Os03g27420 | Os03g0392000 | - | Detail |
| CX3g030757 | 3:14,141,915-14,146,091 | + | C1H3g16459 | C2H3g21955 | LOC_Os03g27450 | Os03g0392300 | - | Detail |
| CX3g027329 | 3:14,149,381-14,150,598 | - | C1H7g19542 | C2H7g30397 | LOC_Os03g27460 | Os03g0392400 | - | Detail |
| CX3g027984 | 3:14,160,136-14,163,671 | - | C1H3g12299 | C2H3g23340 | LOC_Os03g27550 | Os03g0392600 | - | Detail |
| CX3g029492 | 3:14,162,104-14,162,259 | + | - | - | - | Os03g0392833 | - | Detail |
| CX3g027782 | 3:14,178,322-14,190,335 | - | C1H3g05327 | C2H3g09365 | LOC_Os03g27510 | Os03g0393100 | - | Detail |
| CX3g026827 | 3:14,211,288-14,223,114 | - | C1H3g28596 | C2H3g00521 | LOC_Os03g27550 | Os03g0393300 | - | Detail |