| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25174 | 5:23,313,508-23,318,106 | + | C1H5g20148 | CX5g037678 | LOC_Os05g48600 | Os05g0559600 | OsGT43E | Detail |
| C2H5g23630 | 5:23,322,496-23,323,008 | + | C1H5g04745 | CX5g037832 | LOC_Os05g48610 | Os05g0559800 | - | Detail |
| C2H5g12589 | 5:23,323,209-23,333,187 | - | C1H5g10502 | CX5g040407 | LOC_Os05g48620 | Os05g0559900 | - | Detail |
| C2H5g00100 | 5:23,334,202-23,335,270 | + | C1H5g25744 | CX5g038817 | LOC_Os05g48630 | Os05g0560000 | - | Detail |
| C2H5g06003 | 5:23,335,749-23,338,647 | - | C1H5g19833 | CX5g038416 | LOC_Os05g48640 | Os05g0560100 | OsRopGEF2 | Detail |
| C2H5g16951 | 5:23,339,586-23,340,263 | - | C1H5g26191 | CX5g036968 | LOC_Os05g48650 | Os05g0560200 | OsDOG1L-2 | Detail |
| C2H5g04171 | 5:23,342,037-23,344,096 | - | C1H5g10477 | CX5g040994 | LOC_Os05g48660 | Os05g0560300 | - | Detail |
| C2H5g23278 | 5:23,347,409-23,353,039 | + | C1H5g07983 | CX5g040506 | LOC_Os05g48670 | Os05g0560400 | - | Detail |
| C2H5g11774 | 5:23,353,595-23,353,938 | - | C1H5g15622 | CX5g041006 | LOC_Os05g48680 | Os05g0560500 | - | Detail |
| C2H5g07077 | 5:23,357,253-23,358,293 | + | C1H5g18490 | CX5g039073 | LOC_Os05g48690 | Os05g0560600 | - | Detail |
| C2H5g25068 | 5:23,369,154-23,370,706 | - | C1H5g04118 | CX5g037700 | LOC_Os05g48700 | Os05g0560900 | OsGA2ox8 | Detail |
| C2H5g27839 | 5:23,389,673-23,389,900 | + | C1H5g06450 | CX5g037256 | LOC_Os05g48740 | Os05g0561400 | - | Detail |
| C2H5g17404 | 5:23,390,349-23,393,557 | - | C1H5g19616 | CX5g036713 | LOC_Os05g48750 | Os05g0561500 | - | Detail |
| C2H5g28708 | 5:23,398,380-23,402,322 | + | C1H5g06337 | CX5g037464 | LOC_Os05g48760 | Os05g0561600 | - | Detail |
| C2H5g03536 | 5:23,404,718-23,408,998 | - | C1H5g29811 | CX5g040205 | LOC_Os05g48790 | Os05g0562000 | - | Detail |
| C2H5g13005 | 5:23,414,234-23,417,141 | - | C1H5g21574 | CX5g037282 | LOC_Os05g48800 | Os05g0562200 | - | Detail |
| C2H5g23462 | 5:23,417,250-23,432,794 | - | C1H5g24863 | CX5g039085 | LOC_Os05g48820 | Os05g0562400 | - | Detail |
| C2H5g25280 | 5:23,434,954-23,435,676 | - | C1H5g03290 | CX5g039144 | LOC_Os05g48840 | Os05g0562800 | - | Detail |
| C2H5g28682 | 5:23,444,798-23,446,037 | + | C1H5g26594 | CX5g037488 | LOC_Os05g48850 | Os05g0563000 | OsSND2 | Detail |
| C2H5g09501 | 5:23,446,423-23,453,664 | - | C1H5g29749 | CX5g039932 | LOC_Os05g48855 | Os05g0563050 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025732 | 3:14,001,539-14,005,584 | + | C1H3g20114 | C2H3g24243 | LOC_Os03g27230 | Os03g0389700 | OsDAHPS1, DAHPS1 | Detail |
| CX3g028319 | 3:14,010,964-14,018,063 | + | C1H3g30971 | C2H3g12972 | LOC_Os03g27250 | Os03g0389900 | - | Detail |
| CX3g027960 | 3:14,019,414-14,021,460 | - | C1H3g19742 | C2H3g06738 | LOC_Os03g27260 | Os03g0390000 | - | Detail |
| CX3g031288 | 3:14,025,481-14,029,298 | - | C1H3g17252 | C2H3g21967 | LOC_Os03g27280 | Os03g0390200 | - | Detail |
| CX3g029813 | 3:14,048,617-14,050,327 | + | C1H3g08377 | C2H3g10154 | LOC_Os03g27290 | Os03g0390400 | - | Detail |
| CX3g025879 | 3:14,054,529-14,055,211 | + | C1H3g03476 | C2H3g16150 | LOC_Os03g27310 | Os03g0390600 | - | Detail |
| CX3g025932 | 3:14,056,208-14,059,192 | + | C1H3g30084 | C2H3g25165 | LOC_Os03g27320 | Os03g0390700 | OsTTL | Detail |
| CX3g027950 | 3:14,061,901-14,064,846 | + | C1H3g29350 | C2H3g02856 | LOC_Os03g27350 | Os03g0391000 | - | Detail |
| CX3g026532 | 3:14,068,825-14,070,048 | + | C1H3g09929 | C2H3g17457 | LOC_Os03g27360 | Os03g0391100 | - | Detail |
| CX3g028456 | 3:14,075,627-14,080,400 | + | C1H3g16806 | C2H3g06527 | LOC_Os03g27370 | Os03g0391400 | OsPLDα6, OsPLDalpha6 | Detail |
| CX3g030612 | 3:14,090,180-14,090,341 | + | - | - | - | - | - | Detail |
| CX3g028215 | 3:14,092,555-14,093,487 | - | C1H3g30949 | C2H3g10546 | LOC_Os03g27390 | Os03g0391700 | OsbHLH138 | Detail |
| CX3g028568 | 3:14,106,024-14,106,304 | - | - | - | - | - | - | Detail |
| CX3g030816 | 3:14,130,251-14,132,229 | - | C1H3g13034 | C2H3g23808 | LOC_Os03g27420 | Os03g0392000 | - | Detail |
| CX3g030757 | 3:14,141,915-14,146,091 | + | C1H3g16459 | C2H3g21955 | LOC_Os03g27450 | Os03g0392300 | - | Detail |
| CX3g027329 | 3:14,149,381-14,150,598 | - | C1H7g19542 | C2H7g30397 | LOC_Os03g27460 | Os03g0392400 | - | Detail |
| CX3g027984 | 3:14,160,136-14,163,671 | - | C1H3g12299 | C2H3g23340 | LOC_Os03g27550 | Os03g0392600 | - | Detail |
| CX3g029492 | 3:14,162,104-14,162,259 | + | - | - | - | Os03g0392833 | - | Detail |
| CX3g027782 | 3:14,178,322-14,190,335 | - | C1H3g05327 | C2H3g09365 | LOC_Os03g27510 | Os03g0393100 | - | Detail |
| CX3g026827 | 3:14,211,288-14,223,114 | - | C1H3g28596 | C2H3g00521 | LOC_Os03g27550 | Os03g0393300 | - | Detail |