| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19859 | 3:275,286-276,089 | + | C1H3g27934 | CX3g029495 | LOC_Os03g01650 | Os03g0106900 | - | Detail |
| C2H3g20988 | 3:277,919-278,233 | + | C1H3g20839 | - | - | Os03g0106550 | - | Detail |
| C2H3g21802 | 3:280,755-281,558 | + | C1H3g09448 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C2H3g24000 | 3:286,286-287,089 | + | C1H3g09211 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C2H3g29856 | 3:289,474-290,277 | - | C1H3g27934 | CX3g025368 | LOC_Os03g01610 | Os03g0106500 | - | Detail |
| C2H3g18319 | 3:294,137-298,154 | - | C1H3g02983 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C2H3g12781 | 3:299,902-301,883 | + | C1H3g17953 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g12928 | 3:301,892-306,733 | + | C1H3g31596 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g02258 | 3:309,231-310,675 | - | C1H3g21747 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C2H3g07101 | 3:317,398-325,316 | + | C1H3g27800 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C2H3g28769 | 3:329,534-336,123 | + | C1H3g21135 | CX3g028047 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| C2H3g30259 | 3:338,145-339,134 | + | C1H3g09738 | CX3g029882 | LOC_Os03g01730 | Os03g0107600 | - | Detail |
| C2H3g13144 | 3:342,381-342,698 | + | C1H3g00509 | CX10g008515 | LOC_Os03g01740 | Os03g0107700 | - | Detail |
| C2H3g20378 | 3:343,714-348,648 | - | C1H3g25096 | CX3g029326 | LOC_Os03g01750 | Os03g0107800 | - | Detail |
| C2H3g26807 | 3:351,610-353,831 | + | C1H3g17188 | CX3g028603 | LOC_Os03g01760 | Os03g0107900 | - | Detail |
| C2H3g26003 | 3:355,485-356,808 | - | C1H3g00848 | CX3g030389 | LOC_Os03g01770 | Os03g0108000 | ACR2.2, CDC25.2, OsACR2.2, OsStr21, STR21 | Detail |
| C2H3g13800 | 3:357,667-358,714 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01780 | Os03g0108200 | - | Detail |
| C2H3g05829 | 3:359,984-364,409 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01790 | Os03g0108200 | - | Detail |
| C2H3g04954 | 3:364,453-365,755 | - | C1H3g27345 | CX3g028491 | LOC_Os03g01800 | Os03g0108300 | OsXTH19 | Detail |
| C2H3g18698 | 3:369,393-370,937 | + | C1H3g11796 | CX3g027775 | LOC_Os03g01810 | Os03g0108400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030562 | 3:13,290,536-13,290,685 | + | - | - | - | - | - | Detail |
| CX3g029933 | 3:13,293,052-13,294,334 | + | C1H3g10607 | C2H3g19573 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| CX3g025508 | 3:13,296,972-13,312,967 | + | C1H3g00737 | C2H3g08354 | LOC_Os03g26000 | Os03g0377300 | - | Detail |
| CX3g029316 | 3:13,314,900-13,315,550 | - | C1H3g07849 | C2H3g28235 | LOC_Os03g26300 | Os03g0377600 | - | Detail |
| CX3g027228 | 3:13,316,272-13,320,012 | - | C1H3g26368 | C2H3g21234 | LOC_Os03g26044 | Os03g0377700 | OsCSLA5 | Detail |
| CX3g031025 | 3:13,321,246-13,321,617 | - | - | - | - | - | - | Detail |
| CX3g028269 | 3:13,330,240-13,331,653 | + | C1H3g10865 | C2H3g12418 | LOC_Os03g26070 | - | - | Detail |
| CX3g030093 | 3:13,332,100-13,335,633 | + | C1H3g26564 | C2H3g02469 | LOC_Os03g26080 | Os03g0378000 | OsAPY2 | Detail |
| CX3g027268 | 3:13,340,306-13,340,611 | + | - | - | LOC_Os03g29710 | - | - | Detail |
| CX3g027721 | 3:13,344,352-13,344,606 | + | C1H12g24303 | - | LOC_Os03g29710 | - | - | Detail |
| CX3g025812 | 3:13,345,941-13,352,250 | + | C1H3g21733 | C2H3g20387 | LOC_Os03g26090 | Os03g0378200 | - | Detail |
| CX3g025424 | 3:13,364,359-13,365,285 | + | C1H3g16595 | C2H3g05143 | LOC_Os03g26130 | Os03g0378500 | Os2R_MYB37 | Detail |
| CX3g024953 | 3:13,370,395-13,370,544 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g025289 | 3:13,376,550-13,376,828 | - | - | - | LOC_Os03g26180 | Os03g0378832 | - | Detail |
| CX3g029246 | 3:13,382,699-13,385,412 | + | C1H3g28191 | C2H3g12084 | LOC_Os03g26200 | Os03g0379100 | - | Detail |
| CX3g024992 | 3:13,388,987-13,390,556 | + | C1H3g18201 | C2H3g20720 | LOC_Os03g26210 | Os03g0379300 | OsIRO3 | Detail |
| CX3g025371 | 3:13,391,230-13,393,263 | - | C1H3g08145 | C2H3g11313 | LOC_Os03g26220 | Os03g0379400 | - | Detail |
| CX3g029639 | 3:13,394,984-13,396,953 | + | C1H3g10024 | C2H3g22224 | LOC_Os03g26229 | Os03g0379500 | - | Detail |
| CX3g027757 | 3:13,398,831-13,399,040 | - | - | - | - | - | - | Detail |
| CX3g025942 | 3:13,400,205-13,412,367 | + | C1H3g30785 | C2H3g19366 | LOC_Os03g26250 | Os03g0379801 | - | Detail |