| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02593 | 4:29,326,920-29,329,525 | - | C1H4g30864 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C2H4g28957 | 4:29,330,937-29,334,919 | + | C1H4g09343 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C2H4g00001 | 4:29,335,587-29,337,864 | - | C1H4g05828 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C2H4g12242 | 4:29,346,217-29,350,384 | + | C1H4g09596 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C2H4g11326 | 4:29,350,962-29,353,825 | + | C1H4g30725 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C2H4g21652 | 4:29,354,782-29,355,237 | - | - | CX4g034903 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| C2H4g19860 | 4:29,362,450-29,363,014 | + | C1H4g22043 | CX4g033683 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g10951 | 4:29,379,023-29,380,236 | - | C1H4g10999 | CX4g036202 | LOC_Os04g35610 | Os04g0118700 | - | Detail |
| C2H4g15180 | 4:29,387,199-29,389,061 | + | C1H4g22979 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g00735 | 4:29,390,985-29,393,367 | + | C1H4g03241 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03747 | 4:29,396,383-29,398,015 | + | C1H4g01851 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03474 | 4:29,400,385-29,401,819 | + | C1H4g29852 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g06767 | 4:29,415,602-29,416,401 | - | C1H4g05569 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C2H4g00020 | 4:29,417,068-29,427,230 | - | C1H4g31368 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C2H4g16878 | 4:29,428,962-29,429,486 | + | - | CX4g036271 | LOC_Os04g43720 | Os04g0517600 | - | Detail |
| C2H4g20070 | 4:29,431,894-29,432,340 | - | - | - | - | - | - | Detail |
| C2H4g09686 | 4:29,431,991-29,432,428 | + | - | - | - | - | - | Detail |
| C2H4g30626 | 4:29,434,012-29,437,838 | - | C1H4g07804 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C2H4g27314 | 4:29,439,637-29,441,953 | + | C1H4g29276 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C2H4g03010 | 4:29,447,466-29,448,038 | - | C1H4g22147 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026222 | 3:13,118,365-13,118,604 | + | - | - | - | Os03g0372500 | - | Detail |
| CX3g030141 | 3:13,120,622-13,126,772 | + | C1H3g09237 | C2H3g13066 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| CX3g030815 | 3:13,129,478-13,130,081 | - | C1H3g20988 | C2H3g24461 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| CX3g025086 | 3:13,132,413-13,135,157 | + | C1H3g26671 | C2H3g09558 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| CX3g025320 | 3:13,138,104-13,138,295 | + | - | - | - | Os10g0143800 | - | Detail |
| CX3g027223 | 3:13,143,483-13,144,919 | + | - | - | LOC_Os03g25640 | Os03g0372900 | - | Detail |
| CX3g029031 | 3:13,160,235-13,163,614 | - | C1H3g02459 | C2H3g30423 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| CX3g025227 | 3:13,166,319-13,166,555 | + | - | - | - | Os03g0752000 | - | Detail |
| CX3g025872 | 3:13,168,199-13,172,662 | + | C1H3g03430 | C2H3g09363 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| CX3g031135 | 3:13,173,182-13,175,713 | - | C1H3g29992 | C2H3g02420 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| CX3g028239 | 3:13,186,271-13,188,698 | - | C1H3g04281 | C2H3g06785 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| CX3g025908 | 3:13,195,382-13,198,170 | + | C1H3g12991 | C2H3g13807 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| CX3g031122 | 3:13,218,980-13,226,694 | - | C1H3g22864 | C2H3g09283 | LOC_Os03g25840 | Os03g0375300 | - | Detail |
| CX3g025557 | 3:13,236,572-13,239,346 | - | C1H3g05274 | C2H3g17665 | LOC_Os03g25920 | Os03g0375966 | - | Detail |
| CX3g028356 | 3:13,244,441-13,247,593 | - | C1H3g13157 | C2H3g22221 | LOC_Os03g25930 | Os03g0376000 | - | Detail |
| CX3g030420 | 3:13,250,968-13,254,233 | - | C1H3g30616 | C2H3g00210 | LOC_Os03g25940 | Os03g0376100 | - | Detail |
| CX3g029886 | 3:13,261,835-13,263,566 | - | C1H3g18959 | C2H3g30664 | LOC_Os03g25960 | Os03g0376600 | OsRRM2 | Detail |
| CX3g028665 | 3:13,266,168-13,266,683 | + | - | C2H3g14769 | - | Os03g0173500 | - | Detail |
| CX3g027038 | 3:13,272,891-13,275,282 | - | C1H3g09004 | C2H3g23850 | LOC_Os03g25970 | Os03g0376800 | - | Detail |
| CX3g029788 | 3:13,277,672-13,282,171 | + | C1H3g26655 | C2H3g09355 | LOC_Os03g25980 | Os03g0376900 | - | Detail |