| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g18428 | 3:10,113,603-10,119,053 | + | C1H3g25351 | CX3g028132 | LOC_Os03g20180 | Os03g0317000 | - | Detail |
| C2H3g29051 | 3:10,120,425-10,123,556 | + | C1H3g17147 | CX3g030095 | LOC_Os03g20190 | Os03g0317100 | - | Detail |
| C2H3g17176 | 3:10,127,690-10,129,036 | + | C1H3g11404 | CX3g028796 | LOC_Os03g20210 | Os03g0317300 | - | Detail |
| C2H3g05954 | 3:10,129,665-10,130,966 | + | C1H3g16001 | CX3g026260 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| C2H3g08312 | 3:10,148,285-10,149,496 | + | C1H3g07890 | CX3g025491 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| C2H3g29183 | 3:10,156,535-10,157,829 | + | C1H3g20479 | CX3g028957 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| C2H3g10315 | 3:10,159,326-10,165,265 | - | C1H3g31254 | CX3g024974 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| C2H3g15586 | 3:10,165,700-10,170,792 | - | C1H3g27797 | CX3g025701 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |
| C2H3g06773 | 3:10,189,059-10,189,592 | + | C1H3g25597 | CX3g031095 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| C2H3g23539 | 3:10,198,181-10,202,944 | + | C1H3g29099 | CX3g030494 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| C2H3g28901 | 3:10,210,141-10,211,572 | + | C1H3g19829 | CX3g028434 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| C2H3g27412 | 3:10,215,103-10,216,385 | + | C1H3g23043 | CX3g031077 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| C2H3g25279 | 3:10,218,816-10,224,305 | - | C1H3g21490 | CX3g026317 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| C2H3g09371 | 3:10,236,975-10,240,513 | - | C1H3g25971 | CX3g025212 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| C2H3g22340 | 3:10,246,385-10,254,520 | - | C1H3g08252 | CX3g029293 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| C2H3g01972 | 3:10,258,993-10,260,337 | + | C1H3g09342 | CX3g029244 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| C2H3g13875 | 3:10,265,951-10,266,607 | - | C1H3g07396 | CX3g027813 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| C2H3g23140 | 3:10,282,338-10,287,474 | + | C1H3g21035 | CX3g030303 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| C2H3g14660 | 3:10,290,528-10,293,295 | + | C1H3g22135 | CX3g027683 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| C2H3g12919 | 3:10,294,659-10,297,133 | + | C1H3g27273 | CX3g026494 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006208 | 1:15,001,031-15,001,474 | + | - | - | - | - | - | Detail |
| CX1g005499 | 1:15,011,808-15,012,071 | - | - | - | - | Os01g0709750 | - | Detail |
| CX1g005727 | 1:15,015,335-15,026,633 | + | C1H1g02613 | C2H1g27614 | LOC_Os01g29230 | Os01g0388500 | - | Detail |
| CX1g005025 | 1:15,029,603-15,030,253 | - | C1H1g29900 | C2H1g05311 | LOC_Os01g29240 | Os01g0388700 | - | Detail |
| CX1g003693 | 1:15,045,763-15,046,356 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g29280 | Os01g0389200 | - | Detail |
| CX1g006602 | 1:15,072,780-15,073,331 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g29330 | Os01g0389700 | - | Detail |
| CX1g000137 | 1:15,109,719-15,123,042 | + | C1H1g22138 | C2H1g16964 | LOC_Os01g29409 | Os01g0390400 | - | Detail |
| CX1g006424 | 1:15,124,976-15,126,949 | + | C1H1g02777 | C2H1g11561 | LOC_Os01g29430 | Os01g0390600 | - | Detail |
| CX1g001981 | 1:15,179,731-15,182,673 | - | C1H1g13800 | C2H1g01088 | LOC_Os01g29469 | Os01g0390900 | - | Detail |
| CX1g006913 | 1:15,215,964-15,218,345 | + | C1H7g20360 | C2H7g10129 | LOC_Os10g01740 | - | - | Detail |
| CX1g006512 | 1:15,242,525-15,242,761 | - | - | - | - | Os07g0464001 | - | Detail |
| CX1g006422 | 1:15,248,346-15,248,883 | - | C1H1g10294 | C2H1g12481 | - | Os01g0533900 | - | Detail |
| CX1g003817 | 1:15,249,201-15,249,641 | - | - | - | - | - | - | Detail |
| CX1g004142 | 1:15,277,199-15,277,417 | - | - | - | - | - | - | Detail |
| CX1g002823 | 1:15,297,809-15,298,710 | + | - | - | - | - | - | Detail |
| CX1g004314 | 1:15,334,044-15,334,229 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001239 | 1:15,336,325-15,339,453 | + | C1H1g24970 | C2H1g16913 | LOC_Os01g29740 | Os01g0392100 | - | Detail |
| CX1g005327 | 1:15,371,168-15,371,377 | + | - | - | - | Os01g0612350 | - | Detail |
| CX1g006926 | 1:15,397,629-15,399,899 | - | C1H1g14271 | C2H1g24661 | LOC_Os01g01510 | Os01g0104800 | - | Detail |
| CX1g003712 | 1:15,410,355-15,416,062 | + | C1H1g30437 | C2H1g26980 | - | Os01g0104600 | - | Detail |