| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g23023 | 12:16,844,722-16,846,654 | + | C1H12g07006 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C2H12g01778 | 12:16,849,512-16,852,172 | - | C1H12g03851 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C2H12g29019 | 12:16,857,902-16,861,024 | + | C1H12g10988 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C2H12g27722 | 12:16,864,496-16,867,163 | + | C1H12g02725 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C2H12g10634 | 12:16,868,389-16,874,203 | - | C1H12g25225 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C2H12g22973 | 12:16,875,174-16,875,362 | + | C1H6g25666 | - | - | - | - | Detail |
| C2H12g27329 | 12:16,888,298-16,888,769 | + | - | - | - | - | - | Detail |
| C2H12g11130 | 12:16,900,311-16,907,890 | + | C1H12g02230 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C2H12g25999 | 12:16,909,770-16,913,007 | - | C1H12g03710 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C2H12g03027 | 12:16,923,231-16,932,224 | - | C1H12g17769 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C2H12g05645 | 12:16,942,922-16,945,372 | - | C1H12g27986 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C2H12g00633 | 12:16,970,353-16,972,425 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g11467 | 12:16,972,650-16,973,531 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g07164 | 12:17,001,212-17,002,585 | - | C1H12g26954 | CX12g018119 | LOC_Os12g32920 | Os12g0481000 | - | Detail |
| C2H12g09815 | 12:17,006,303-17,007,725 | - | C1H12g03418 | CX12g015793 | LOC_Os12g32930 | Os12g0513800 | - | Detail |
| C2H12g04487 | 12:17,008,233-17,010,395 | - | C1H12g27576 | CX12g018613 | LOC_Os12g32940 | Os12g0514000 | OsPLT15 | Detail |
| C2H12g14026 | 12:17,014,333-17,017,549 | - | C1H12g02478 | CX12g015332 | LOC_Os12g32950 | Os12g0514100 | - | Detail |
| C2H12g26822 | 12:17,022,203-17,022,805 | - | C1H12g29231 | CX12g016868 | LOC_Os12g32970 | Os12g0514300 | - | Detail |
| C2H12g20474 | 12:17,025,754-17,029,407 | - | C1H12g18347 | CX12g018673 | LOC_Os12g32980 | Os12g0514400 | SAB23 | Detail |
| C2H12g13347 | 12:17,031,309-17,037,504 | - | C1H12g11241 | CX12g017191 | LOC_Os12g32986 | Os12g0514500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028490 | 3:12,584,943-12,585,323 | - | C1H8g11477 | C2H6g02310 | - | - | - | Detail |
| CX3g028041 | 3:12,596,906-12,600,965 | - | C1H3g26242 | C2H3g25785 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| CX3g030844 | 3:12,621,946-12,622,221 | - | - | - | - | - | - | Detail |
| CX3g029989 | 3:12,623,527-12,626,492 | + | C1H3g19204 | C2H3g24954 | LOC_Os03g24730 | Os03g0362200 | - | Detail |
| CX3g027415 | 3:12,638,964-12,641,598 | + | C1H3g31305 | C2H3g21455 | LOC_Os03g24820 | Os03g0363100 | - | Detail |
| CX3g028253 | 3:12,642,392-12,644,723 | + | C1H3g22124 | C2H3g21145 | LOC_Os03g24830 | Os03g0363200 | - | Detail |
| CX3g025045 | 3:12,646,559-12,646,897 | + | - | - | - | - | - | Detail |
| CX3g025171 | 3:12,648,344-12,649,385 | + | C1H3g12375 | C2H3g24910 | LOC_Os03g24844 | Os03g0363400 | - | Detail |
| CX3g026007 | 3:12,650,706-12,655,850 | - | C1H3g31412 | C2H3g07234 | LOC_Os03g24860 | Os03g0363600 | OsERD2 | Detail |
| CX3g026520 | 3:12,657,482-12,661,989 | - | C1H3g09669 | C2H3g23765 | LOC_Os03g24870 | Os03g0363600 | OsERD2 | Detail |
| CX3g026469 | 3:12,665,619-12,667,301 | - | C1H3g25341 | C2H3g07525 | LOC_Os03g24880 | Os03g0363700 | - | Detail |
| CX3g025654 | 3:12,667,580-12,671,751 | + | C1H3g24559 | C2H3g30503 | LOC_Os03g24890 | Os03g0363800 | OsSCL28 | Detail |
| CX3g026595 | 3:12,674,954-12,679,170 | + | C1H3g28751 | C2H3g27719 | LOC_Os03g24900 | Os03g0363900 | DHHC09, DHHC09-II | Detail |
| CX3g027300 | 3:12,680,089-12,682,729 | - | C1H3g13730 | C2H3g02370 | LOC_Os03g24910 | Os03g0363950 | - | Detail |
| CX3g025659 | 3:12,688,994-12,689,382 | - | C1H3g05488 | C2H3g17587 | LOC_Os03g24920 | Os03g0364000 | - | Detail |
| CX3g026493 | 3:12,691,475-12,692,077 | + | - | - | - | - | - | Detail |
| CX3g031356 | 3:12,697,823-12,699,441 | + | C1H3g09584 | C2H3g05857 | LOC_Os03g24930 | Os03g0364400 | - | Detail |
| CX3g025767 | 3:12,703,039-12,709,958 | - | C1H3g19834 | C2H3g14199 | LOC_Os03g24940 | Os03g0364500 | - | Detail |
| CX3g028674 | 3:12,721,944-12,722,105 | - | - | - | - | - | - | Detail |
| CX3g028963 | 3:12,723,279-12,725,587 | + | C1H3g08779 | C2H3g02255 | LOC_Os03g24950 | Os03g0364700 | - | Detail |