| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04414 | 1:11,130,938-11,132,486 | + | C2H1g11900 | - | - | - | - | Detail |
| C1H1g24035 | 1:11,134,390-11,135,292 | - | C2H1g09100 | CX1g001954 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C1H1g22940 | 1:11,156,748-11,159,323 | + | C2H1g05958 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C1H1g12319 | 1:11,159,676-11,165,731 | - | C2H1g26866 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C1H1g03998 | 1:11,171,500-11,177,206 | + | C2H1g27428 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C1H1g30338 | 1:11,181,068-11,181,580 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g12639 | 1:11,182,471-11,184,477 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g19397 | 1:11,198,061-11,201,521 | + | C2H1g06794 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C1H1g03743 | 1:11,201,584-11,203,108 | - | C2H1g22823 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C1H1g15782 | 1:11,206,647-11,207,843 | + | C2H1g15539 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C1H1g14705 | 1:11,239,365-11,239,742 | + | C2H1g24217 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g09878 | 1:11,243,065-11,244,522 | + | C2H1g06111 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g18229 | 1:11,254,481-11,258,659 | + | C2H1g00150 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C1H1g29292 | 1:11,270,176-11,274,225 | + | C2H1g27905 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C1H1g15812 | 1:11,275,564-11,277,738 | - | C2H1g02015 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g31043 | 1:11,283,396-11,284,474 | - | C2H1g12678 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g25028 | 1:11,295,061-11,297,671 | + | C2H1g25435 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g00421 | 1:11,307,290-11,308,319 | + | C2H1g11384 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g09638 | 1:11,308,851-11,312,333 | - | C2H1g19970 | CX1g005436 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| C1H1g01670 | 1:11,315,158-11,318,039 | - | C2H1g05656 | CX1g002203 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028490 | 3:12,584,943-12,585,323 | - | C1H8g11477 | C2H6g02310 | - | - | - | Detail |
| CX3g028041 | 3:12,596,906-12,600,965 | - | C1H3g26242 | C2H3g25785 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| CX3g030844 | 3:12,621,946-12,622,221 | - | - | - | - | - | - | Detail |
| CX3g029989 | 3:12,623,527-12,626,492 | + | C1H3g19204 | C2H3g24954 | LOC_Os03g24730 | Os03g0362200 | - | Detail |
| CX3g027415 | 3:12,638,964-12,641,598 | + | C1H3g31305 | C2H3g21455 | LOC_Os03g24820 | Os03g0363100 | - | Detail |
| CX3g028253 | 3:12,642,392-12,644,723 | + | C1H3g22124 | C2H3g21145 | LOC_Os03g24830 | Os03g0363200 | - | Detail |
| CX3g025045 | 3:12,646,559-12,646,897 | + | - | - | - | - | - | Detail |
| CX3g025171 | 3:12,648,344-12,649,385 | + | C1H3g12375 | C2H3g24910 | LOC_Os03g24844 | Os03g0363400 | - | Detail |
| CX3g026007 | 3:12,650,706-12,655,850 | - | C1H3g31412 | C2H3g07234 | LOC_Os03g24860 | Os03g0363600 | OsERD2 | Detail |
| CX3g026520 | 3:12,657,482-12,661,989 | - | C1H3g09669 | C2H3g23765 | LOC_Os03g24870 | Os03g0363600 | OsERD2 | Detail |
| CX3g026469 | 3:12,665,619-12,667,301 | - | C1H3g25341 | C2H3g07525 | LOC_Os03g24880 | Os03g0363700 | - | Detail |
| CX3g025654 | 3:12,667,580-12,671,751 | + | C1H3g24559 | C2H3g30503 | LOC_Os03g24890 | Os03g0363800 | OsSCL28 | Detail |
| CX3g026595 | 3:12,674,954-12,679,170 | + | C1H3g28751 | C2H3g27719 | LOC_Os03g24900 | Os03g0363900 | DHHC09, DHHC09-II | Detail |
| CX3g027300 | 3:12,680,089-12,682,729 | - | C1H3g13730 | C2H3g02370 | LOC_Os03g24910 | Os03g0363950 | - | Detail |
| CX3g025659 | 3:12,688,994-12,689,382 | - | C1H3g05488 | C2H3g17587 | LOC_Os03g24920 | Os03g0364000 | - | Detail |
| CX3g026493 | 3:12,691,475-12,692,077 | + | - | - | - | - | - | Detail |
| CX3g031356 | 3:12,697,823-12,699,441 | + | C1H3g09584 | C2H3g05857 | LOC_Os03g24930 | Os03g0364400 | - | Detail |
| CX3g025767 | 3:12,703,039-12,709,958 | - | C1H3g19834 | C2H3g14199 | LOC_Os03g24940 | Os03g0364500 | - | Detail |
| CX3g028674 | 3:12,721,944-12,722,105 | - | - | - | - | - | - | Detail |
| CX3g028963 | 3:12,723,279-12,725,587 | + | C1H3g08779 | C2H3g02255 | LOC_Os03g24950 | Os03g0364700 | - | Detail |