| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02435 | 4:26,718,889-26,720,819 | + | C1H4g11906 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C2H4g14262 | 4:26,724,353-26,728,915 | - | C1H4g03528 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C2H4g30596 | 4:26,734,579-26,740,509 | - | C1H4g12683 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C2H4g10814 | 4:26,743,828-26,748,949 | - | C1H4g15444 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C2H4g02940 | 4:26,754,868-26,757,310 | + | C1H4g09621 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C2H4g14823 | 4:26,758,946-26,760,350 | + | C1H4g18002 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C2H4g28997 | 4:26,763,313-26,766,976 | + | C1H4g00068 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C2H4g06699 | 4:26,770,988-26,772,512 | + | C1H4g05036 | - | - | Os04g0614300 | - | Detail |
| C2H4g17218 | 4:26,775,472-26,781,526 | + | C1H4g02712 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C2H4g10708 | 4:26,790,164-26,799,292 | + | C1H4g17515 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C2H4g23243 | 4:26,811,933-26,816,868 | + | C1H4g20369 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C2H4g24013 | 4:26,817,995-26,822,447 | + | C1H4g29702 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C2H4g04550 | 4:26,823,039-26,823,723 | - | C1H4g06180 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C2H4g11553 | 4:26,826,153-26,829,725 | + | C1H4g16195 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C2H4g12331 | 4:26,830,483-26,831,606 | + | C1H4g22078 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| C2H4g15420 | 4:26,843,505-26,848,072 | + | C1H4g15848 | CX4g034962 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| C2H4g00576 | 4:26,849,148-26,854,139 | + | C1H4g23171 | CX4g031812 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| C2H4g30305 | 4:26,854,437-26,858,817 | - | C1H4g27864 | CX4g035991 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| C2H4g12428 | 4:26,857,632-26,858,214 | + | - | - | - | - | - | Detail |
| C2H4g21361 | 4:26,858,288-26,858,792 | + | - | - | - | Os04g0615850 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027651 | 3:12,028,818-12,029,054 | - | C1H3g12995 | C2H3g21766 | LOC_Os03g23000 | Os03g0353333 | - | Detail |
| CX3g026671 | 3:12,033,955-12,034,549 | + | C1H3g26840 | C2H3g01500 | LOC_Os03g23010 | Os03g0353400 | - | Detail |
| CX3g029165 | 3:12,038,770-12,040,770 | + | C1H3g22809 | C2H3g07846 | LOC_Os03g23020 | Os03g0353500 | - | Detail |
| CX3g029602 | 3:12,041,921-12,057,291 | + | C1H3g12732 | C2H3g26280 | LOC_Os03g23030 | Os03g0353600 | OsAPT1 | Detail |
| CX3g025377 | 3:12,060,532-12,061,182 | + | - | - | - | - | - | Detail |
| CX3g031014 | 3:12,061,935-12,062,129 | + | - | - | - | - | - | Detail |
| CX3g025370 | 3:12,070,786-12,075,744 | + | C1H3g30312 | C2H3g26883 | LOC_Os03g23050 | Os03g0353900 | - | Detail |
| CX3g029597 | 3:12,087,304-12,088,728 | - | C1H3g22495 | C2H3g03041 | LOC_Os03g23920 | Os03g0355300 | - | Detail |
| CX3g025017 | 3:12,093,644-12,097,423 | + | C1H3g01916 | C2H3g25328 | LOC_Os03g23935 | Os03g0355200 | - | Detail |
| CX3g027961 | 3:12,098,535-12,099,497 | + | - | C2H3g07529 | LOC_Os03g23940 | Os03g0355500 | - | Detail |
| CX3g025703 | 3:12,100,363-12,106,033 | - | C1H3g22764 | C2H3g10284 | LOC_Os03g23950 | Os03g0355600 | - | Detail |
| CX3g031073 | 3:12,115,530-12,117,960 | + | C1H3g05770 | C2H3g06071 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| CX3g030920 | 3:12,118,659-12,120,767 | - | C1H3g06132 | C2H3g19901 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| CX3g029716 | 3:12,122,056-12,122,514 | + | - | - | - | Os07g0616100 | - | Detail |
| CX3g031321 | 3:12,122,556-12,125,044 | - | C1H3g21571 | C2H3g13826 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| CX3g028805 | 3:12,130,771-12,133,077 | - | C1H3g12783 | C2H3g28171 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| CX3g029294 | 3:12,134,515-12,135,126 | + | C1H3g13830 | C2H3g25986 | LOC_Os03g24030 | Os03g0356400 | - | Detail |
| CX3g029486 | 3:12,137,522-12,139,234 | - | C1H3g04093 | C2H3g03916 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| CX3g028879 | 3:12,151,367-12,154,360 | - | C1H3g10870 | C2H3g11837 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| CX3g029746 | 3:12,163,475-12,165,787 | + | C1H3g31470 | C2H3g26682 | LOC_Os03g24070 | Os03g0356498 | - | Detail |