| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027651 | 3:12,028,818-12,029,054 | - | C1H3g12995 | C2H3g21766 | LOC_Os03g23000 | Os03g0353333 | - | Detail |
| CX3g026671 | 3:12,033,955-12,034,549 | + | C1H3g26840 | C2H3g01500 | LOC_Os03g23010 | Os03g0353400 | - | Detail |
| CX3g029165 | 3:12,038,770-12,040,770 | + | C1H3g22809 | C2H3g07846 | LOC_Os03g23020 | Os03g0353500 | - | Detail |
| CX3g029602 | 3:12,041,921-12,057,291 | + | C1H3g12732 | C2H3g26280 | LOC_Os03g23030 | Os03g0353600 | OsAPT1 | Detail |
| CX3g025377 | 3:12,060,532-12,061,182 | + | - | - | - | - | - | Detail |
| CX3g031014 | 3:12,061,935-12,062,129 | + | - | - | - | - | - | Detail |
| CX3g025370 | 3:12,070,786-12,075,744 | + | C1H3g30312 | C2H3g26883 | LOC_Os03g23050 | Os03g0353900 | - | Detail |
| CX3g029597 | 3:12,087,304-12,088,728 | - | C1H3g22495 | C2H3g03041 | LOC_Os03g23920 | Os03g0355300 | - | Detail |
| CX3g025017 | 3:12,093,644-12,097,423 | + | C1H3g01916 | C2H3g25328 | LOC_Os03g23935 | Os03g0355200 | - | Detail |
| CX3g027961 | 3:12,098,535-12,099,497 | + | - | C2H3g07529 | LOC_Os03g23940 | Os03g0355500 | - | Detail |
| CX3g025703 | 3:12,100,363-12,106,033 | - | C1H3g22764 | C2H3g10284 | LOC_Os03g23950 | Os03g0355600 | - | Detail |
| CX3g031073 | 3:12,115,530-12,117,960 | + | C1H3g05770 | C2H3g06071 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| CX3g030920 | 3:12,118,659-12,120,767 | - | C1H3g06132 | C2H3g19901 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| CX3g029716 | 3:12,122,056-12,122,514 | + | - | - | - | Os07g0616100 | - | Detail |
| CX3g031321 | 3:12,122,556-12,125,044 | - | C1H3g21571 | C2H3g13826 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| CX3g028805 | 3:12,130,771-12,133,077 | - | C1H3g12783 | C2H3g28171 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| CX3g029294 | 3:12,134,515-12,135,126 | + | C1H3g13830 | C2H3g25986 | LOC_Os03g24030 | Os03g0356400 | - | Detail |
| CX3g029486 | 3:12,137,522-12,139,234 | - | C1H3g04093 | C2H3g03916 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| CX3g028879 | 3:12,151,367-12,154,360 | - | C1H3g10870 | C2H3g11837 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| CX3g029746 | 3:12,163,475-12,165,787 | + | C1H3g31470 | C2H3g26682 | LOC_Os03g24070 | Os03g0356498 | - | Detail |