| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09325 | 4:1,638,294-1,640,327 | - | C2H4g29753 | CX4g036540 | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| C1H4g24046 | 4:1,641,510-1,642,004 | - | - | CX4g032974 | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| C1H4g10673 | 4:1,656,966-1,658,423 | + | - | CX4g034537 | LOC_Os04g04100 | - | - | Detail |
| C1H4g20023 | 4:1,719,955-1,720,560 | + | C2H4g04395 | - | LOC_Os04g04230 | Os04g0131800 | - | Detail |
| C1H4g20239 | 4:1,722,093-1,729,360 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g25848 | 4:1,737,417-1,749,711 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g18623 | 4:1,753,592-1,753,955 | - | C2H4g06971 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g04462 | 4:1,762,452-1,768,721 | + | C2H4g08446 | CX4g033436 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| C1H4g17799 | 4:1,778,796-1,783,507 | + | C2H4g30640 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C1H4g19447 | 4:1,799,060-1,799,641 | - | C2H4g19144 | CX4g034832 | - | - | - | Detail |
| C1H4g14310 | 4:1,806,840-1,807,794 | - | - | CX4g034477 | - | - | - | Detail |
| C1H4g23533 | 4:1,832,950-1,836,850 | + | C2H4g05610 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C1H4g07028 | 4:1,861,368-1,870,740 | + | C2H4g08696 | CX4g032198 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g23122 | 4:1,908,961-1,909,862 | + | C2H4g09916 | CX4g034389 | LOC_Os04g04690 | Os04g0123800 | - | Detail |
| C1H4g13170 | 4:1,915,132-1,916,706 | + | C2H4g08696 | CX4g035554 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g11470 | 4:1,927,614-1,933,541 | - | C2H4g11644 | CX2g022606 | LOC_Os04g04950 | Os04g0136200 | - | Detail |
| C1H4g23677 | 4:1,939,940-1,940,300 | - | C2H4g00094 | CX4g033097 | LOC_Os12g23430 | - | - | Detail |
| C1H4g22739 | 4:1,940,890-1,942,034 | - | C2H4g14390 | CX4g033097 | LOC_Os12g23400 | - | - | Detail |
| C1H4g01991 | 4:1,945,350-1,946,200 | - | - | - | - | - | - | Detail |
| C1H4g23277 | 4:1,948,307-1,950,580 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027651 | 3:12,028,818-12,029,054 | - | C1H3g12995 | C2H3g21766 | LOC_Os03g23000 | Os03g0353333 | - | Detail |
| CX3g026671 | 3:12,033,955-12,034,549 | + | C1H3g26840 | C2H3g01500 | LOC_Os03g23010 | Os03g0353400 | - | Detail |
| CX3g029165 | 3:12,038,770-12,040,770 | + | C1H3g22809 | C2H3g07846 | LOC_Os03g23020 | Os03g0353500 | - | Detail |
| CX3g029602 | 3:12,041,921-12,057,291 | + | C1H3g12732 | C2H3g26280 | LOC_Os03g23030 | Os03g0353600 | OsAPT1 | Detail |
| CX3g025377 | 3:12,060,532-12,061,182 | + | - | - | - | - | - | Detail |
| CX3g031014 | 3:12,061,935-12,062,129 | + | - | - | - | - | - | Detail |
| CX3g025370 | 3:12,070,786-12,075,744 | + | C1H3g30312 | C2H3g26883 | LOC_Os03g23050 | Os03g0353900 | - | Detail |
| CX3g029597 | 3:12,087,304-12,088,728 | - | C1H3g22495 | C2H3g03041 | LOC_Os03g23920 | Os03g0355300 | - | Detail |
| CX3g025017 | 3:12,093,644-12,097,423 | + | C1H3g01916 | C2H3g25328 | LOC_Os03g23935 | Os03g0355200 | - | Detail |
| CX3g027961 | 3:12,098,535-12,099,497 | + | - | C2H3g07529 | LOC_Os03g23940 | Os03g0355500 | - | Detail |
| CX3g025703 | 3:12,100,363-12,106,033 | - | C1H3g22764 | C2H3g10284 | LOC_Os03g23950 | Os03g0355600 | - | Detail |
| CX3g031073 | 3:12,115,530-12,117,960 | + | C1H3g05770 | C2H3g06071 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| CX3g030920 | 3:12,118,659-12,120,767 | - | C1H3g06132 | C2H3g19901 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| CX3g029716 | 3:12,122,056-12,122,514 | + | - | - | - | Os07g0616100 | - | Detail |
| CX3g031321 | 3:12,122,556-12,125,044 | - | C1H3g21571 | C2H3g13826 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| CX3g028805 | 3:12,130,771-12,133,077 | - | C1H3g12783 | C2H3g28171 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| CX3g029294 | 3:12,134,515-12,135,126 | + | C1H3g13830 | C2H3g25986 | LOC_Os03g24030 | Os03g0356400 | - | Detail |
| CX3g029486 | 3:12,137,522-12,139,234 | - | C1H3g04093 | C2H3g03916 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| CX3g028879 | 3:12,151,367-12,154,360 | - | C1H3g10870 | C2H3g11837 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| CX3g029746 | 3:12,163,475-12,165,787 | + | C1H3g31470 | C2H3g26682 | LOC_Os03g24070 | Os03g0356498 | - | Detail |