| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026989 | 3:11,340,880-11,342,711 | - | C1H3g30937 | C2H3g03307 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| CX3g026765 | 3:11,345,347-11,345,499 | + | - | - | - | - | - | Detail |
| CX3g028644 | 3:11,350,427-11,353,198 | + | C1H3g22536 | C2H3g17458 | LOC_Os03g22040 | Os03g0339700 | - | Detail |
| CX3g029505 | 3:11,355,925-11,357,244 | - | C1H3g12381 | C2H3g13815 | LOC_Os03g22050 | Os03g0339900 | - | Detail |
| CX3g030897 | 3:11,375,688-11,375,903 | - | - | - | - | - | - | Detail |
| CX3g027881 | 3:11,395,766-11,401,206 | - | C1H3g19641 | C2H3g21937 | LOC_Os03g22120 | Os03g0340500 | - | Detail |
| CX3g028679 | 3:11,405,778-11,407,349 | + | C1H3g22688 | C2H3g11733 | LOC_Os03g22140 | Os03g0340700 | - | Detail |
| CX3g031206 | 3:11,411,470-11,421,883 | + | C1H3g27719 | C2H3g03250 | LOC_Os03g22160 | Os03g0340900 | ARE2 | Detail |
| CX3g028278 | 3:11,423,981-11,424,160 | + | - | - | - | - | - | Detail |
| CX3g029548 | 3:11,429,977-11,430,800 | + | C1H3g08303 | C2H3g25873 | LOC_Os03g22170 | Os03g0341000 | ERF66, OsERF66 | Detail |
| CX3g029946 | 3:11,432,165-11,432,605 | - | - | - | - | - | - | Detail |
| CX3g028062 | 3:11,434,166-11,436,367 | - | C1H3g00753 | C2H3g03921 | LOC_Os03g22180 | Os03g0341100 | - | Detail |
| CX3g030546 | 3:11,437,252-11,442,760 | - | C1H3g18892 | C2H3g07860 | LOC_Os03g22190 | Os03g0341200 | - | Detail |
| CX3g027655 | 3:11,445,726-11,447,814 | + | C1H3g26990 | C2H3g11247 | LOC_Os03g22200 | Os03g0341300 | - | Detail |
| CX3g031034 | 3:11,473,477-11,475,178 | - | C1H3g19465 | C2H3g25012 | LOC_Os03g22270 | Os03g0342900 | - | Detail |
| CX3g027432 | 3:11,481,197-11,485,608 | + | C1H3g19573 | C2H3g07847 | LOC_Os03g22320 | Os03g0343300 | - | Detail |
| CX3g030144 | 3:11,487,496-11,490,907 | + | C1H3g04598 | C2H3g27542 | LOC_Os03g22330 | Os03g0343400 | - | Detail |
| CX3g027840 | 3:11,492,052-11,493,285 | - | C1H3g18164 | C2H3g22833 | LOC_Os03g22340 | Os03g0343500 | - | Detail |
| CX3g028939 | 3:11,497,495-11,499,929 | + | C1H3g07503 | C2H3g27042 | LOC_Os03g22350 | Os03g0343700 | - | Detail |
| CX3g026926 | 3:11,505,588-11,505,992 | + | - | - | LOC_Os03g22360 | Os03g0343800 | - | Detail |