| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g23403 | 5:18,746,111-18,749,068 | - | C1H5g19287 | CX5g039936 | LOC_Os05g38040 | Os05g0454500 | - | Detail |
| C2H5g21423 | 5:18,781,110-18,785,845 | + | C1H5g02292 | CX5g038338 | LOC_Os05g38120 | Os05g0455200 | - | Detail |
| C2H5g21494 | 5:18,798,594-18,800,239 | + | C1H5g18222 | CX5g037653 | LOC_Os05g38140 | Os05g0455400 | OsbHLH58, OsPRI2 | Detail |
| C2H5g15588 | 5:18,801,166-18,807,877 | - | C1H5g05465 | CX5g038237 | LOC_Os05g38150 | Os05g0455500 | P5CS2, OsP5CS1 | Detail |
| C2H5g29702 | 5:18,810,943-18,813,929 | + | C1H5g03707 | CX5g039333 | LOC_Os05g38160 | Os05g0455600 | - | Detail |
| C2H5g07721 | 5:18,814,551-18,818,990 | - | C1H5g15257 | CX5g036880 | LOC_Os05g38170 | Os05g0455700 | - | Detail |
| C2H5g09326 | 5:18,820,229-18,823,941 | + | C1H5g24331 | CX5g039124 | LOC_Os05g38180 | Os05g0455800 | - | Detail |
| C2H5g22995 | 5:18,825,377-18,828,001 | + | C1H5g20708 | CX5g039226 | LOC_Os05g38190 | Os05g0455900 | - | Detail |
| C2H5g06077 | 5:18,832,081-18,833,752 | - | C1H5g20913 | CX5g038180 | LOC_Os05g38210 | Os05g0456000 | - | Detail |
| C2H5g16890 | 5:18,834,582-18,836,434 | - | C1H5g23637 | CX5g039970 | LOC_Os05g38230 | Os05g0456200 | - | Detail |
| C2H5g05222 | 5:18,837,440-18,841,901 | - | C1H5g01651 | CX5g039970 | LOC_Os05g38230 | Os05g0456300 | - | Detail |
| C2H5g21931 | 5:18,848,241-18,850,434 | + | C1H5g29090 | CX5g040017 | LOC_Os05g38250 | Os05g0456500 | - | Detail |
| C2H5g10230 | 5:18,852,852-18,853,076 | + | C1H5g21162 | - | - | Os05g0456800 | - | Detail |
| C2H5g17856 | 5:18,853,870-18,854,142 | - | C1H5g00525 | CX5g039920 | LOC_Os05g38264 | Os05g0456900 | - | Detail |
| C2H5g16298 | 5:18,858,695-18,863,187 | - | C1H5g05737 | CX5g038189 | LOC_Os05g38270 | Os05g0456925 | - | Detail |
| C2H5g10696 | 5:18,866,233-18,866,583 | + | C1H5g19303 | CX5g040829 | - | Os05g0457000 | - | Detail |
| C2H5g10559 | 5:18,867,082-18,868,714 | - | C1H5g06161 | CX5g037372 | LOC_Os05g38290 | Os05g0457200 | OsPP2C49 | Detail |
| C2H5g01697 | 5:18,873,239-18,886,220 | - | - | CX5g037387 | - | - | - | Detail |
| C2H5g09348 | 5:18,894,548-18,896,080 | + | C1H5g31777 | CX5g038384 | LOC_Os05g38320 | Os05g0457600 | - | Detail |
| C2H5g18834 | 5:18,897,654-18,901,866 | - | C1H5g25102 | CX5g038584 | LOC_Os05g38330 | Os05g0457700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025595 | 3:10,846,493-10,850,793 | - | C1H3g28228 | C2H3g14604 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| CX3g026436 | 3:10,861,668-10,865,954 | + | C1H3g13172 | C2H3g27204 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| CX3g027510 | 3:10,866,772-10,872,002 | - | C1H3g07101 | C2H3g15921 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| CX3g030370 | 3:10,891,354-10,894,335 | + | C1H3g17399 | C2H3g16525 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| CX3g028976 | 3:10,896,878-10,897,453 | - | C1H3g03324 | C2H3g29448 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| CX3g026949 | 3:10,903,304-10,904,009 | + | C1H3g28515 | C2H3g00436 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| CX3g025397 | 3:10,906,775-10,914,849 | - | C1H3g15931 | C2H3g14433 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| CX3g028546 | 3:10,920,326-10,920,805 | - | - | - | - | - | - | Detail |
| CX3g030007 | 3:10,929,627-10,932,238 | + | C1H3g27306 | C2H3g10310 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| CX3g028069 | 3:10,932,657-10,935,317 | - | C1H3g15898 | C2H3g17481 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| CX3g029311 | 3:10,940,906-10,942,803 | - | C1H3g21366 | C2H3g22879 | - | Os03g0332500 | - | Detail |
| CX3g027147 | 3:10,944,999-10,947,022 | - | C1H3g21148 | C2H3g01804 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| CX3g025440 | 3:10,950,455-10,954,297 | - | C1H3g11764 | C2H3g10583 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| CX3g027316 | 3:10,963,853-10,965,936 | + | C1H3g02450 | C2H3g24190 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| CX3g028180 | 3:10,966,860-10,970,933 | - | C1H3g13994 | C2H3g30311 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| CX3g029941 | 3:10,971,903-10,981,631 | + | C1H3g12459 | C2H3g26938 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| CX3g028103 | 3:10,983,364-10,986,048 | + | C1H3g29664 | C2H3g19269 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| CX3g028855 | 3:10,990,273-10,994,753 | + | C1H3g30788 | C2H3g24047 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| CX3g028002 | 3:10,995,281-10,995,787 | + | C1H3g06087 | C2H3g24886 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| CX3g028500 | 3:10,996,719-10,998,035 | - | C1H3g05344 | C2H3g22866 | LOC_Os03g21700 | Os03g0335100 | - | Detail |