| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26186 | 3:11,785,574-11,790,510 | - | C1H3g17947 | CX3g027882 | LOC_Os03g22800 | Os03g0351400 | - | Detail |
| C2H3g20435 | 3:11,816,196-11,817,722 | + | C1H3g29229 | CX3g027904 | LOC_Os03g22810 | Os03g0351500 | CSD1 | Detail |
| C2H3g14393 | 3:11,833,297-11,835,660 | - | C1H3g18570 | CX3g025092 | - | - | - | Detail |
| C2H3g15700 | 3:11,839,218-11,843,043 | + | C1H3g27962 | CX3g027668 | LOC_Os03g22870 | Os03g0352200 | - | Detail |
| C2H3g04437 | 3:11,843,634-11,846,602 | - | C1H3g04417 | CX3g025721 | LOC_Os03g22880 | Os03g0352300 | - | Detail |
| C2H3g25554 | 3:11,848,294-11,853,039 | + | C1H3g10842 | CX3g030381 | LOC_Os03g22890 | Os03g0352400 | OsNug2 | Detail |
| C2H3g13717 | 3:11,858,682-11,869,917 | + | C1H3g16038 | CX3g025999 | LOC_Os03g22900 | Os03g0352500 | OsINO80 | Detail |
| C2H3g17584 | 3:11,886,296-11,888,754 | - | C1H3g08430 | CX3g025916 | LOC_Os03g22950 | Os03g0352800 | OsMTACP2, CTB18 | Detail |
| C2H3g12615 | 3:11,890,640-11,891,671 | + | C1H3g07024 | CX3g029374 | LOC_Os03g22960 | Os03g0353000 | - | Detail |
| C2H3g04581 | 3:11,893,911-11,897,406 | + | C1H3g09018 | CX3g029843 | LOC_Os03g22990 | Os03g0353300 | - | Detail |
| C2H3g21766 | 3:11,897,409-11,897,645 | - | C1H3g12995 | CX3g027651 | LOC_Os03g23000 | Os03g0353333 | - | Detail |
| C2H3g01500 | 3:11,902,339-11,903,507 | + | C1H3g26840 | CX3g026671 | LOC_Os03g23010 | Os03g0353400 | - | Detail |
| C2H3g07846 | 3:11,907,459-11,909,361 | + | C1H3g22809 | CX3g029165 | LOC_Os03g23020 | Os03g0353500 | - | Detail |
| C2H3g26280 | 3:11,910,520-11,925,731 | + | C1H3g12732 | CX3g029602 | LOC_Os03g23030 | Os03g0353600 | OsAPT1 | Detail |
| C2H3g03041 | 3:11,929,416-11,930,867 | - | C1H3g22495 | CX3g029597 | LOC_Os03g23920 | Os03g0355300 | - | Detail |
| C2H3g25328 | 3:11,932,504-11,937,502 | + | C1H3g01916 | CX3g025017 | LOC_Os03g23935 | Os03g0355200 | - | Detail |
| C2H3g07529 | 3:11,939,830-11,940,795 | + | - | CX3g027961 | LOC_Os03g23940 | Os03g0355500 | - | Detail |
| C2H3g10284 | 3:11,941,275-11,947,568 | - | C1H3g22764 | CX3g025703 | LOC_Os03g23950 | Os03g0355600 | - | Detail |
| C2H3g06071 | 3:11,956,108-11,959,620 | + | C1H3g05770 | CX3g031073 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| C2H3g19901 | 3:11,960,275-11,962,367 | - | C1H3g06132 | CX3g030920 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025595 | 3:10,846,493-10,850,793 | - | C1H3g28228 | C2H3g14604 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| CX3g026436 | 3:10,861,668-10,865,954 | + | C1H3g13172 | C2H3g27204 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| CX3g027510 | 3:10,866,772-10,872,002 | - | C1H3g07101 | C2H3g15921 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| CX3g030370 | 3:10,891,354-10,894,335 | + | C1H3g17399 | C2H3g16525 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| CX3g028976 | 3:10,896,878-10,897,453 | - | C1H3g03324 | C2H3g29448 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| CX3g026949 | 3:10,903,304-10,904,009 | + | C1H3g28515 | C2H3g00436 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| CX3g025397 | 3:10,906,775-10,914,849 | - | C1H3g15931 | C2H3g14433 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| CX3g028546 | 3:10,920,326-10,920,805 | - | - | - | - | - | - | Detail |
| CX3g030007 | 3:10,929,627-10,932,238 | + | C1H3g27306 | C2H3g10310 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| CX3g028069 | 3:10,932,657-10,935,317 | - | C1H3g15898 | C2H3g17481 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| CX3g029311 | 3:10,940,906-10,942,803 | - | C1H3g21366 | C2H3g22879 | - | Os03g0332500 | - | Detail |
| CX3g027147 | 3:10,944,999-10,947,022 | - | C1H3g21148 | C2H3g01804 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| CX3g025440 | 3:10,950,455-10,954,297 | - | C1H3g11764 | C2H3g10583 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| CX3g027316 | 3:10,963,853-10,965,936 | + | C1H3g02450 | C2H3g24190 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| CX3g028180 | 3:10,966,860-10,970,933 | - | C1H3g13994 | C2H3g30311 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| CX3g029941 | 3:10,971,903-10,981,631 | + | C1H3g12459 | C2H3g26938 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| CX3g028103 | 3:10,983,364-10,986,048 | + | C1H3g29664 | C2H3g19269 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| CX3g028855 | 3:10,990,273-10,994,753 | + | C1H3g30788 | C2H3g24047 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| CX3g028002 | 3:10,995,281-10,995,787 | + | C1H3g06087 | C2H3g24886 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| CX3g028500 | 3:10,996,719-10,998,035 | - | C1H3g05344 | C2H3g22866 | LOC_Os03g21700 | Os03g0335100 | - | Detail |