| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16783 | 1:21,890,169-21,892,373 | + | C2H1g01711 | CX1g001096 | LOC_Os01g42770 | Os01g0613300 | - | Detail |
| C1H1g19620 | 1:21,892,734-21,894,015 | - | C2H1g08037 | CX1g001646 | LOC_Os01g42780 | Os01g0613500 | - | Detail |
| C1H1g09978 | 1:21,902,707-21,904,441 | - | C2H1g03375 | CX1g001198 | LOC_Os01g42790 | Os01g0613800 | - | Detail |
| C1H1g21693 | 1:21,905,326-21,911,674 | - | C2H1g08375 | CX1g006583 | LOC_Os01g42800 | Os01g0613900 | - | Detail |
| C1H1g30142 | 1:21,913,452-21,917,078 | + | C2H1g30219 | CX1g005988 | LOC_Os01g42810 | Os01g0614300 | - | Detail |
| C1H1g30904 | 1:21,925,022-21,929,373 | + | C2H1g29942 | CX1g001445 | LOC_Os01g42830 | Os01g0614700 | - | Detail |
| C1H1g01885 | 1:21,930,081-21,936,100 | - | C2H1g10991 | CX1g001663 | LOC_Os01g42850 | Os01g0614900 | - | Detail |
| C1H1g14641 | 1:21,939,922-21,940,125 | - | C2H1g28283 | CX1g001822 | LOC_Os01g42860 | Os01g0615050 | OCPI1 | Detail |
| C1H1g14133 | 1:21,945,460-21,947,313 | - | C2H1g18656 | CX1g002212 | LOC_Os01g42870 | Os01g0615200 | - | Detail |
| C1H1g10409 | 1:21,948,182-21,950,802 | - | C2H1g17016 | CX1g004428 | LOC_Os01g42880 | Os01g0615300 | - | Detail |
| C1H1g29477 | 1:21,975,745-21,983,975 | + | C2H1g28413 | CX1g005260 | LOC_Os01g42950 | Os01g0616100 | - | Detail |
| C1H1g00446 | 1:22,008,372-22,012,383 | + | C2H1g04418 | CX1g004354 | LOC_Os01g42960 | Os01g0616333 | - | Detail |
| C1H1g28451 | 1:22,018,941-22,025,508 | - | C2H1g00927 | CX1g002070 | LOC_Os01g42970 | Os01g0616400 | - | Detail |
| C1H1g01886 | 1:22,028,154-22,030,441 | + | C2H1g26183 | CX1g000783 | LOC_Os01g42980 | Os01g0616500 | - | Detail |
| C1H1g19102 | 1:22,031,494-22,034,362 | + | C2H1g13748 | CX1g005608 | LOC_Os01g42990 | Os01g0616600 | - | Detail |
| C1H1g27380 | 1:22,036,013-22,042,387 | - | C2H1g01334 | CX1g005424 | LOC_Os01g43020 | Os01g0616900 | OsCTPS1 | Detail |
| C1H1g02684 | 1:22,071,606-22,085,388 | - | C2H1g12553 | CX1g007195 | LOC_Os01g43030 | Os01g0617500 | - | Detail |
| C1H1g04403 | 1:22,101,331-22,110,077 | + | C2H1g03908 | CX1g002530 | LOC_Os01g43050 | Os01g0617700 | - | Detail |
| C1H1g00516 | 1:22,110,838-22,112,485 | - | C2H1g08569 | CX1g000604 | LOC_Os01g43060 | Os01g0617800 | - | Detail |
| C1H1g09495 | 1:22,114,081-22,116,686 | + | C2H1g01081 | CX1g004316 | LOC_Os01g43070 | Os01g0617900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025595 | 3:10,846,493-10,850,793 | - | C1H3g28228 | C2H3g14604 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| CX3g026436 | 3:10,861,668-10,865,954 | + | C1H3g13172 | C2H3g27204 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| CX3g027510 | 3:10,866,772-10,872,002 | - | C1H3g07101 | C2H3g15921 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| CX3g030370 | 3:10,891,354-10,894,335 | + | C1H3g17399 | C2H3g16525 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| CX3g028976 | 3:10,896,878-10,897,453 | - | C1H3g03324 | C2H3g29448 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| CX3g026949 | 3:10,903,304-10,904,009 | + | C1H3g28515 | C2H3g00436 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| CX3g025397 | 3:10,906,775-10,914,849 | - | C1H3g15931 | C2H3g14433 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| CX3g028546 | 3:10,920,326-10,920,805 | - | - | - | - | - | - | Detail |
| CX3g030007 | 3:10,929,627-10,932,238 | + | C1H3g27306 | C2H3g10310 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| CX3g028069 | 3:10,932,657-10,935,317 | - | C1H3g15898 | C2H3g17481 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| CX3g029311 | 3:10,940,906-10,942,803 | - | C1H3g21366 | C2H3g22879 | - | Os03g0332500 | - | Detail |
| CX3g027147 | 3:10,944,999-10,947,022 | - | C1H3g21148 | C2H3g01804 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| CX3g025440 | 3:10,950,455-10,954,297 | - | C1H3g11764 | C2H3g10583 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| CX3g027316 | 3:10,963,853-10,965,936 | + | C1H3g02450 | C2H3g24190 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| CX3g028180 | 3:10,966,860-10,970,933 | - | C1H3g13994 | C2H3g30311 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| CX3g029941 | 3:10,971,903-10,981,631 | + | C1H3g12459 | C2H3g26938 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| CX3g028103 | 3:10,983,364-10,986,048 | + | C1H3g29664 | C2H3g19269 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| CX3g028855 | 3:10,990,273-10,994,753 | + | C1H3g30788 | C2H3g24047 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| CX3g028002 | 3:10,995,281-10,995,787 | + | C1H3g06087 | C2H3g24886 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| CX3g028500 | 3:10,996,719-10,998,035 | - | C1H3g05344 | C2H3g22866 | LOC_Os03g21700 | Os03g0335100 | - | Detail |