| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10728 | 9:16,830,371-16,832,276 | + | C2H9g26463 | CX9g055900 | LOC_Os09g34230 | Os09g0518000 | OsUGT74H4 | Detail |
| C1H9g19198 | 9:16,838,064-16,839,569 | + | C2H9g02520 | CX9g054966 | LOC_Os09g34250 | Os09g0518200 | OsSGT1 | Detail |
| C1H9g30947 | 9:16,844,284-16,845,772 | + | C2H9g22734 | CX9g055928 | LOC_Os09g34270 | Os09g0518400 | - | Detail |
| C1H9g09147 | 9:16,852,135-16,856,191 | + | C2H9g08049 | CX9g055676 | LOC_Os09g34280 | Os09g0518500 | - | Detail |
| C1H9g05389 | 9:16,857,063-16,858,689 | - | C2H9g03145 | CX9g056764 | LOC_Os09g34290 | Os09g0518600 | - | Detail |
| C1H9g00022 | 9:16,859,212-16,863,946 | - | C2H9g00047 | CX9g055254 | LOC_Os09g34300 | Os09g0518700 | - | Detail |
| C1H9g22729 | 9:16,866,758-16,867,299 | + | C2H9g05387 | CX9g057932 | LOC_Os09g34310 | - | - | Detail |
| C1H9g23239 | 9:16,872,391-16,873,428 | - | - | CX9g056160 | LOC_Os09g34320 | Os09g0518900 | - | Detail |
| C1H9g17507 | 9:16,882,934-16,883,785 | - | C2H9g03669 | CX9g055953 | LOC_Os09g34330 | Os09g0519100 | - | Detail |
| C1H9g15652 | 9:16,900,586-16,901,373 | - | C2H9g27958 | - | - | - | - | Detail |
| C1H9g11494 | 9:16,902,311-16,902,511 | - | C2H1g00715 | CX9g055320 | LOC_Os12g03160 | - | - | Detail |
| C1H9g20303 | 9:16,915,583-16,916,061 | - | C2H9g09976 | CX9g055247 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| C1H9g03744 | 9:16,920,848-16,923,558 | + | C2H9g00711 | CX9g055700 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| C1H9g28676 | 9:16,924,601-16,926,496 | + | C2H9g07064 | CX9g057087 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| C1H9g02310 | 9:16,929,155-16,932,585 | + | C2H9g21344 | CX9g057384 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| C1H9g04530 | 9:16,933,479-16,934,397 | - | C2H9g01771 | CX9g055638 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| C1H9g24828 | 9:16,939,968-16,941,371 | + | C2H9g21190 | CX9g056986 | LOC_Os09g32780 | - | - | Detail |
| C1H9g25767 | 9:16,944,020-16,947,414 | - | C2H9g04653 | CX9g055686 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| C1H9g15041 | 9:16,949,494-16,953,854 | + | C2H9g24414 | CX9g058165 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| C1H9g08027 | 9:16,955,910-16,957,580 | - | C2H9g26435 | CX9g057097 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025595 | 3:10,846,493-10,850,793 | - | C1H3g28228 | C2H3g14604 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| CX3g026436 | 3:10,861,668-10,865,954 | + | C1H3g13172 | C2H3g27204 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| CX3g027510 | 3:10,866,772-10,872,002 | - | C1H3g07101 | C2H3g15921 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| CX3g030370 | 3:10,891,354-10,894,335 | + | C1H3g17399 | C2H3g16525 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| CX3g028976 | 3:10,896,878-10,897,453 | - | C1H3g03324 | C2H3g29448 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| CX3g026949 | 3:10,903,304-10,904,009 | + | C1H3g28515 | C2H3g00436 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| CX3g025397 | 3:10,906,775-10,914,849 | - | C1H3g15931 | C2H3g14433 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| CX3g028546 | 3:10,920,326-10,920,805 | - | - | - | - | - | - | Detail |
| CX3g030007 | 3:10,929,627-10,932,238 | + | C1H3g27306 | C2H3g10310 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| CX3g028069 | 3:10,932,657-10,935,317 | - | C1H3g15898 | C2H3g17481 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| CX3g029311 | 3:10,940,906-10,942,803 | - | C1H3g21366 | C2H3g22879 | - | Os03g0332500 | - | Detail |
| CX3g027147 | 3:10,944,999-10,947,022 | - | C1H3g21148 | C2H3g01804 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| CX3g025440 | 3:10,950,455-10,954,297 | - | C1H3g11764 | C2H3g10583 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| CX3g027316 | 3:10,963,853-10,965,936 | + | C1H3g02450 | C2H3g24190 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| CX3g028180 | 3:10,966,860-10,970,933 | - | C1H3g13994 | C2H3g30311 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| CX3g029941 | 3:10,971,903-10,981,631 | + | C1H3g12459 | C2H3g26938 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| CX3g028103 | 3:10,983,364-10,986,048 | + | C1H3g29664 | C2H3g19269 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| CX3g028855 | 3:10,990,273-10,994,753 | + | C1H3g30788 | C2H3g24047 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| CX3g028002 | 3:10,995,281-10,995,787 | + | C1H3g06087 | C2H3g24886 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| CX3g028500 | 3:10,996,719-10,998,035 | - | C1H3g05344 | C2H3g22866 | LOC_Os03g21700 | Os03g0335100 | - | Detail |