| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g28117 | 3:1,639,987-1,647,079 | - | C1H3g14010 | CX3g028134 | LOC_Os03g04130 | Os03g0133800 | - | Detail |
| C2H3g06102 | 3:1,648,125-1,648,348 | - | C1H3g08215 | - | - | Os03g0130350 | - | Detail |
| C2H3g18012 | 3:1,648,629-1,653,167 | - | C1H3g28278 | CX3g028998 | LOC_Os03g04140 | Os03g0133900 | OsSAT3 | Detail |
| C2H3g09036 | 3:1,656,377-1,660,724 | + | C1H3g03246 | CX3g030226 | LOC_Os03g04169 | Os03g0134300 | - | Detail |
| C2H3g27438 | 3:1,661,426-1,663,407 | - | C1H3g21430 | CX3g030747 | LOC_Os03g04190 | Os03g0134500 | - | Detail |
| C2H3g10429 | 3:1,672,325-1,673,484 | + | C1H3g13462 | CX3g028092 | - | - | - | Detail |
| C2H3g12826 | 3:1,674,701-1,675,697 | + | C1H3g21849 | CX3g028352 | LOC_Os03g04210 | Os03g0134800 | - | Detail |
| C2H3g04770 | 3:1,676,236-1,677,702 | - | C1H3g16924 | CX3g027728 | LOC_Os03g04220 | Os03g0134900 | - | Detail |
| C2H3g23886 | 3:1,682,511-1,683,738 | - | C1H3g04141 | CX3g027728 | LOC_Os03g04240 | Os03g0135100 | - | Detail |
| C2H3g23080 | 3:1,685,909-1,686,757 | - | C1H3g09964 | CX3g027728 | LOC_Os03g04250 | Os03g0135200 | - | Detail |
| C2H3g08307 | 3:1,688,274-1,689,226 | - | C1H3g28981 | CX3g027728 | LOC_Os03g04260 | Os03g0135300 | - | Detail |
| C2H3g10421 | 3:1,691,314-1,694,206 | - | C1H3g07565 | CX3g030799 | LOC_Os03g04270 | Os03g0135400 | - | Detail |
| C2H3g21011 | 3:1,699,799-1,708,585 | - | C1H3g05387 | CX3g025620 | LOC_Os03g04300 | Os03g0135600 | - | Detail |
| C2H3g13535 | 3:1,712,626-1,714,592 | - | C1H3g28124 | CX3g028533 | LOC_Os03g04310 | Os03g0135700 | - | Detail |
| C2H3g10458 | 3:1,720,804-1,721,652 | - | C1H3g13645 | - | LOC_Os03g04320 | Os03g0135800 | - | Detail |
| C2H3g08967 | 3:1,732,809-1,733,900 | + | C1H3g26367 | CX3g028470 | LOC_Os03g04340 | Os03g0136200 | - | Detail |
| C2H3g15188 | 3:1,740,919-1,742,499 | - | C1H3g15385 | CX3g025886 | LOC_Os03g04360 | Os03g0136400 | OsPHT1;7 | Detail |
| C2H3g08585 | 3:1,743,266-1,743,688 | + | C1H3g19324 | - | LOC_Os03g04370 | Os03g0136500 | - | Detail |
| C2H3g18976 | 3:1,744,041-1,744,523 | + | C1H3g07268 | CX3g030982 | LOC_Os03g04380 | Os03g0136600 | - | Detail |
| C2H3g17961 | 3:1,745,089-1,747,437 | - | C1H3g01856 | CX3g031134 | LOC_Os03g04390 | Os03g0136700 | OsPGL3A | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025827 | 3:10,633,670-10,635,332 | - | C1H3g15600 | C2H3g24174 | LOC_Os03g21000 | Os03g0326500 | - | Detail |
| CX3g029985 | 3:10,638,774-10,644,578 | + | C1H3g21481 | C2H3g04323 | LOC_Os03g08400 | - | - | Detail |
| CX3g025696 | 3:10,646,714-10,651,010 | - | C1H3g09196 | C2H3g29428 | LOC_Os03g21020 | Os03g0326600 | - | Detail |
| CX3g028720 | 3:10,657,482-10,658,793 | - | C1H3g00133 | C2H3g08708 | LOC_Os03g21030 | Os03g0327100 | OsNAC17 | Detail |
| CX3g026693 | 3:10,673,979-10,674,623 | + | C1H3g02748 | - | - | - | - | Detail |
| CX3g025610 | 3:10,679,977-10,683,353 | - | C1H3g01506 | C2H3g15491 | LOC_Os12g23430 | Os03g0822900 | - | Detail |
| CX3g030838 | 3:10,694,831-10,696,624 | - | C1H3g19758 | C2H3g22568 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| CX3g027582 | 3:10,700,686-10,701,009 | + | - | - | - | - | - | Detail |
| CX3g029575 | 3:10,713,406-10,726,838 | + | C1H3g10903 | C2H3g01320 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| CX3g027049 | 3:10,728,095-10,731,330 | - | C1H3g31035 | C2H3g29789 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| CX3g029317 | 3:10,736,076-10,737,916 | + | C1H3g04874 | C2H3g13174 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| CX3g030285 | 3:10,738,439-10,743,268 | - | C1H3g01487 | C2H3g07542 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| CX3g028885 | 3:10,743,743-10,745,313 | + | C1H3g08025 | C2H3g17363 | - | Os03g0789600 | - | Detail |
| CX3g028818 | 3:10,764,602-10,767,504 | + | C1H3g07714 | C2H3g24667 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| CX3g030458 | 3:10,794,638-10,794,823 | + | - | - | - | - | - | Detail |
| CX3g027853 | 3:10,798,372-10,801,365 | + | C1H3g05140 | C2H3g06727 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| CX3g029596 | 3:10,817,377-10,820,826 | - | C1H3g26417 | C2H3g01256 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| CX3g024979 | 3:10,828,663-10,828,836 | + | - | - | - | - | - | Detail |
| CX3g030183 | 3:10,829,787-10,834,455 | + | C1H3g12540 | C2H3g20489 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| CX3g028538 | 3:10,840,065-10,843,223 | + | C1H3g04812 | C2H3g04364 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |