| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g15732 | 1:18,440,872-18,445,580 | + | C2H1g02661 | CX1g002433 | LOC_Os01g36390 | Os01g0544450 | - | Detail |
| C1H1g02132 | 1:18,450,083-18,450,639 | + | - | - | - | Os01g0575801 | - | Detail |
| C1H1g17288 | 1:18,492,905-18,494,730 | - | C2H1g03774 | CX1g004563 | LOC_Os01g36460 | Os01g0545100 | Os2R_MYB8 | Detail |
| C1H1g19208 | 1:18,508,592-18,513,031 | - | C2H1g05288 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C1H1g19939 | 1:18,536,531-18,539,548 | + | C2H1g26336 | CX1g000063 | LOC_Os01g36550 | Os01g0546000 | - | Detail |
| C1H1g27885 | 1:18,539,938-18,542,668 | - | C2H1g28449 | CX1g004410 | LOC_Os01g36560 | Os01g0546100 | - | Detail |
| C1H1g03906 | 1:18,554,039-18,556,562 | - | C2H1g26658 | CX1g005411 | LOC_Os01g36580 | Os01g0546400 | - | Detail |
| C1H1g31287 | 1:18,559,591-18,568,467 | - | C2H1g02492 | CX1g004289 | LOC_Os01g36600 | Os01g0546500 | - | Detail |
| C1H1g12269 | 1:18,568,651-18,570,438 | + | C2H1g11812 | CX1g003967 | LOC_Os01g36610 | Os01g0546700 | - | Detail |
| C1H1g29970 | 1:18,571,936-18,573,045 | - | C2H1g29663 | CX1g005136 | LOC_Os01g36620 | Os01g0546800 | OsPSE1, OsPLL1 | Detail |
| C1H1g12156 | 1:18,582,314-18,583,203 | - | C2H1g29663 | CX1g005136 | LOC_Os01g36620 | Os01g0546800 | OsPSE1, OsPLL1 | Detail |
| C1H1g13286 | 1:18,586,466-18,591,339 | + | C2H1g12931 | - | LOC_Os01g36630 | Os01g0546900 | - | Detail |
| C1H1g20403 | 1:18,608,028-18,611,613 | - | C2H1g12072 | CX1g000363 | LOC_Os01g36660 | Os01g0170500 | - | Detail |
| C1H1g00906 | 1:18,622,885-18,637,134 | - | C2H1g04719 | CX1g002050 | LOC_Os01g36670 | Os01g0547200 | ZBED | Detail |
| C1H1g22917 | 1:18,643,854-18,645,646 | - | C2H1g21123 | - | - | Os01g0547500 | - | Detail |
| C1H1g09182 | 1:18,647,259-18,649,475 | - | C2H1g28243 | CX1g002790 | LOC_Os01g36720 | Os01g0547600 | NRT2.4, OsNRT2.4 | Detail |
| C1H1g04544 | 1:18,697,244-18,701,650 | - | C2H1g04817 | CX1g002199 | LOC_Os01g36790 | Os01g0548600 | - | Detail |
| C1H1g05325 | 1:18,709,479-18,709,925 | - | C2H1g15536 | CX1g001738 | LOC_Os01g36820 | Os01g0548900 | - | Detail |
| C1H1g02071 | 1:18,716,427-18,718,904 | + | C2H1g02901 | CX1g001921 | LOC_Os01g36830 | Os01g0549000 | - | Detail |
| C1H1g25951 | 1:18,719,343-18,731,826 | - | C2H1g03993 | CX1g007010 | LOC_Os01g36840 | Os01g0549200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025827 | 3:10,633,670-10,635,332 | - | C1H3g15600 | C2H3g24174 | LOC_Os03g21000 | Os03g0326500 | - | Detail |
| CX3g029985 | 3:10,638,774-10,644,578 | + | C1H3g21481 | C2H3g04323 | LOC_Os03g08400 | - | - | Detail |
| CX3g025696 | 3:10,646,714-10,651,010 | - | C1H3g09196 | C2H3g29428 | LOC_Os03g21020 | Os03g0326600 | - | Detail |
| CX3g028720 | 3:10,657,482-10,658,793 | - | C1H3g00133 | C2H3g08708 | LOC_Os03g21030 | Os03g0327100 | OsNAC17 | Detail |
| CX3g026693 | 3:10,673,979-10,674,623 | + | C1H3g02748 | - | - | - | - | Detail |
| CX3g025610 | 3:10,679,977-10,683,353 | - | C1H3g01506 | C2H3g15491 | LOC_Os12g23430 | Os03g0822900 | - | Detail |
| CX3g030838 | 3:10,694,831-10,696,624 | - | C1H3g19758 | C2H3g22568 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| CX3g027582 | 3:10,700,686-10,701,009 | + | - | - | - | - | - | Detail |
| CX3g029575 | 3:10,713,406-10,726,838 | + | C1H3g10903 | C2H3g01320 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| CX3g027049 | 3:10,728,095-10,731,330 | - | C1H3g31035 | C2H3g29789 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| CX3g029317 | 3:10,736,076-10,737,916 | + | C1H3g04874 | C2H3g13174 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| CX3g030285 | 3:10,738,439-10,743,268 | - | C1H3g01487 | C2H3g07542 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| CX3g028885 | 3:10,743,743-10,745,313 | + | C1H3g08025 | C2H3g17363 | - | Os03g0789600 | - | Detail |
| CX3g028818 | 3:10,764,602-10,767,504 | + | C1H3g07714 | C2H3g24667 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| CX3g030458 | 3:10,794,638-10,794,823 | + | - | - | - | - | - | Detail |
| CX3g027853 | 3:10,798,372-10,801,365 | + | C1H3g05140 | C2H3g06727 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| CX3g029596 | 3:10,817,377-10,820,826 | - | C1H3g26417 | C2H3g01256 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| CX3g024979 | 3:10,828,663-10,828,836 | + | - | - | - | - | - | Detail |
| CX3g030183 | 3:10,829,787-10,834,455 | + | C1H3g12540 | C2H3g20489 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| CX3g028538 | 3:10,840,065-10,843,223 | + | C1H3g04812 | C2H3g04364 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |