| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27189 | 12:17,903,901-17,904,173 | - | C2H12g13321 | CX12g017911 | LOC_Os12g36490 | Os12g0551200 | - | Detail |
| C1H12g03214 | 12:17,938,154-17,945,109 | + | C2H12g02214 | CX12g016040 | LOC_Os12g36580 | Os12g0551900 | - | Detail |
| C1H12g00609 | 12:17,988,532-17,999,337 | + | C2H12g13321 | CX12g017911 | LOC_Os12g36340 | Os12g0549800 | - | Detail |
| C1H12g03618 | 12:18,018,088-18,020,312 | + | C2H12g04025 | CX12g016889 | LOC_Os12g36610 | Os12g0552200 | - | Detail |
| C1H12g13279 | 12:18,063,693-18,066,452 | - | C2H12g26461 | CX12g015365 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| C1H12g23815 | 12:18,068,060-18,068,720 | - | C2H12g03198 | CX12g016909 | LOC_Os12g36630 | Os12g0552400 | - | Detail |
| C1H12g27529 | 12:18,069,122-18,071,644 | - | C2H12g05175 | CX12g016909 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| C1H12g15786 | 12:18,089,124-18,090,738 | + | C2H12g12611 | CX12g015364 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| C1H12g29275 | 12:18,100,749-18,104,873 | + | C2H12g05930 | CX12g016435 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| C1H12g24562 | 12:18,109,426-18,111,771 | + | C2H12g03052 | CX12g015172 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| C1H12g03146 | 12:18,116,869-18,120,030 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36720 | Os12g0553600 | - | Detail |
| C1H12g00321 | 12:18,121,396-18,122,450 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g09573 | 12:18,124,970-18,125,630 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g15410 | 12:18,131,304-18,131,816 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36690 | Os12g0552900 | - | Detail |
| C1H12g01930 | 12:18,134,352-18,135,125 | + | C2H12g06633 | CX12g016931 | - | - | - | Detail |
| C1H12g28608 | 12:18,138,385-18,140,552 | + | - | - | - | - | - | Detail |
| C1H12g05813 | 12:18,148,764-18,151,316 | + | C2H12g27584 | - | LOC_Os12g36740 | Os12g0516700 | - | Detail |
| C1H12g04068 | 12:18,153,417-18,156,135 | - | C2H12g15252 | CX12g015515 | LOC_Os12g36750 | Os12g0554100 | - | Detail |
| C1H12g01446 | 12:18,161,089-18,171,130 | - | C2H12g14585 | CX12g016097 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| C1H12g23720 | 12:18,172,596-18,177,138 | - | C2H12g15590 | CX12g016599 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025827 | 3:10,633,670-10,635,332 | - | C1H3g15600 | C2H3g24174 | LOC_Os03g21000 | Os03g0326500 | - | Detail |
| CX3g029985 | 3:10,638,774-10,644,578 | + | C1H3g21481 | C2H3g04323 | LOC_Os03g08400 | - | - | Detail |
| CX3g025696 | 3:10,646,714-10,651,010 | - | C1H3g09196 | C2H3g29428 | LOC_Os03g21020 | Os03g0326600 | - | Detail |
| CX3g028720 | 3:10,657,482-10,658,793 | - | C1H3g00133 | C2H3g08708 | LOC_Os03g21030 | Os03g0327100 | OsNAC17 | Detail |
| CX3g026693 | 3:10,673,979-10,674,623 | + | C1H3g02748 | - | - | - | - | Detail |
| CX3g025610 | 3:10,679,977-10,683,353 | - | C1H3g01506 | C2H3g15491 | LOC_Os12g23430 | Os03g0822900 | - | Detail |
| CX3g030838 | 3:10,694,831-10,696,624 | - | C1H3g19758 | C2H3g22568 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| CX3g027582 | 3:10,700,686-10,701,009 | + | - | - | - | - | - | Detail |
| CX3g029575 | 3:10,713,406-10,726,838 | + | C1H3g10903 | C2H3g01320 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| CX3g027049 | 3:10,728,095-10,731,330 | - | C1H3g31035 | C2H3g29789 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| CX3g029317 | 3:10,736,076-10,737,916 | + | C1H3g04874 | C2H3g13174 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| CX3g030285 | 3:10,738,439-10,743,268 | - | C1H3g01487 | C2H3g07542 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| CX3g028885 | 3:10,743,743-10,745,313 | + | C1H3g08025 | C2H3g17363 | - | Os03g0789600 | - | Detail |
| CX3g028818 | 3:10,764,602-10,767,504 | + | C1H3g07714 | C2H3g24667 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| CX3g030458 | 3:10,794,638-10,794,823 | + | - | - | - | - | - | Detail |
| CX3g027853 | 3:10,798,372-10,801,365 | + | C1H3g05140 | C2H3g06727 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| CX3g029596 | 3:10,817,377-10,820,826 | - | C1H3g26417 | C2H3g01256 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| CX3g024979 | 3:10,828,663-10,828,836 | + | - | - | - | - | - | Detail |
| CX3g030183 | 3:10,829,787-10,834,455 | + | C1H3g12540 | C2H3g20489 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| CX3g028538 | 3:10,840,065-10,843,223 | + | C1H3g04812 | C2H3g04364 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |