| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g02272 | 12:14,139,391-14,143,098 | - | C2H12g15729 | CX12g018094 | LOC_Os12g27220 | Os12g0458100 | - | Detail |
| C1H12g18821 | 12:14,168,455-14,175,226 | - | C2H12g06376 | CX12g018094 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| C1H12g10895 | 12:14,178,345-14,178,796 | + | - | - | - | - | - | Detail |
| C1H12g15735 | 12:14,236,779-14,239,065 | - | C2H12g20196 | CX12g016893 | LOC_Os12g27350 | Os12g0459100 | - | Detail |
| C1H12g17860 | 12:14,252,020-14,261,034 | + | - | - | - | - | - | Detail |
| C1H12g05201 | 12:14,302,711-14,303,364 | + | C2H12g01706 | CX12g017942 | LOC_Os12g27440 | Os12g0460100 | - | Detail |
| C1H12g24783 | 12:14,352,870-14,353,562 | + | C2H12g06459 | CX12g018706 | LOC_Os12g27470 | Os12g0460400 | - | Detail |
| C1H12g15830 | 12:14,386,639-14,390,003 | - | C2H12g17065 | CX12g016743 | LOC_Os12g27520 | Os12g0460800 | - | Detail |
| C1H12g08576 | 12:14,397,058-14,397,314 | - | - | - | - | - | - | Detail |
| C1H12g21553 | 12:14,413,866-14,414,612 | - | C2H12g15845 | CX12g015249 | LOC_Os12g27640 | Os12g0461300 | - | Detail |
| C1H12g17942 | 12:14,486,764-14,488,194 | + | C2H12g13285 | CX12g015075 | LOC_Os12g27790 | Os12g0464300 | - | Detail |
| C1H12g24196 | 12:14,496,101-14,497,486 | + | C2H12g13517 | CX12g015075 | LOC_Os12g27810 | Os12g0464300 | - | Detail |
| C1H12g20928 | 12:14,502,532-14,504,923 | + | C2H12g01667 | CX12g016423 | LOC_Os12g27830 | Os12g0464400 | - | Detail |
| C1H12g16659 | 12:14,513,332-14,514,060 | + | C2H12g23283 | CX12g015400 | LOC_Os12g27850 | Os12g0465000 | - | Detail |
| C1H12g04307 | 12:14,531,052-14,531,786 | + | C2H12g13573 | CX12g015400 | LOC_Os12g27930 | Os12g0465000 | - | Detail |
| C1H12g22166 | 12:14,539,676-14,540,207 | + | C2H12g04383 | CX12g015400 | LOC_Os12g27940 | Os12g0465100 | - | Detail |
| C1H12g19521 | 12:14,543,010-14,543,354 | + | C2H12g28192 | - | LOC_Os12g27950 | Os12g0465100 | - | Detail |
| C1H12g13640 | 12:14,550,095-14,550,664 | + | C2H12g07320 | - | LOC_Os12g27960 | Os12g0465100 | - | Detail |
| C1H12g17057 | 12:14,559,489-14,565,193 | - | C2H12g28215 | CX12g018630 | LOC_Os12g27994 | Os12g0465700 | DEC, dec*, dec | Detail |
| C1H12g19519 | 12:14,565,367-14,567,101 | - | C2H12g24524 | CX12g015187 | LOC_Os12g27994 | Os12g0465800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025827 | 3:10,633,670-10,635,332 | - | C1H3g15600 | C2H3g24174 | LOC_Os03g21000 | Os03g0326500 | - | Detail |
| CX3g029985 | 3:10,638,774-10,644,578 | + | C1H3g21481 | C2H3g04323 | LOC_Os03g08400 | - | - | Detail |
| CX3g025696 | 3:10,646,714-10,651,010 | - | C1H3g09196 | C2H3g29428 | LOC_Os03g21020 | Os03g0326600 | - | Detail |
| CX3g028720 | 3:10,657,482-10,658,793 | - | C1H3g00133 | C2H3g08708 | LOC_Os03g21030 | Os03g0327100 | OsNAC17 | Detail |
| CX3g026693 | 3:10,673,979-10,674,623 | + | C1H3g02748 | - | - | - | - | Detail |
| CX3g025610 | 3:10,679,977-10,683,353 | - | C1H3g01506 | C2H3g15491 | LOC_Os12g23430 | Os03g0822900 | - | Detail |
| CX3g030838 | 3:10,694,831-10,696,624 | - | C1H3g19758 | C2H3g22568 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| CX3g027582 | 3:10,700,686-10,701,009 | + | - | - | - | - | - | Detail |
| CX3g029575 | 3:10,713,406-10,726,838 | + | C1H3g10903 | C2H3g01320 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| CX3g027049 | 3:10,728,095-10,731,330 | - | C1H3g31035 | C2H3g29789 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| CX3g029317 | 3:10,736,076-10,737,916 | + | C1H3g04874 | C2H3g13174 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| CX3g030285 | 3:10,738,439-10,743,268 | - | C1H3g01487 | C2H3g07542 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| CX3g028885 | 3:10,743,743-10,745,313 | + | C1H3g08025 | C2H3g17363 | - | Os03g0789600 | - | Detail |
| CX3g028818 | 3:10,764,602-10,767,504 | + | C1H3g07714 | C2H3g24667 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| CX3g030458 | 3:10,794,638-10,794,823 | + | - | - | - | - | - | Detail |
| CX3g027853 | 3:10,798,372-10,801,365 | + | C1H3g05140 | C2H3g06727 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| CX3g029596 | 3:10,817,377-10,820,826 | - | C1H3g26417 | C2H3g01256 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| CX3g024979 | 3:10,828,663-10,828,836 | + | - | - | - | - | - | Detail |
| CX3g030183 | 3:10,829,787-10,834,455 | + | C1H3g12540 | C2H3g20489 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| CX3g028538 | 3:10,840,065-10,843,223 | + | C1H3g04812 | C2H3g04364 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |