| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g04717 | 4:24,611,743-24,626,944 | - | C1H4g04331 | CX4g033771 | LOC_Os04g48040 | Os04g0568850 | - | Detail |
| C2H4g27476 | 4:24,628,324-24,631,531 | - | C1H4g22901 | CX4g035675 | LOC_Os04g48050 | Os04g0568900 | OsRINGzf1 | Detail |
| C2H4g06051 | 4:24,639,426-24,642,258 | + | C1H4g15838 | CX4g036264 | LOC_Os04g48060 | Os04g0569000 | OsRFC4 | Detail |
| C2H4g02683 | 4:24,643,492-24,649,194 | - | C1H4g17902 | CX4g033862 | LOC_Os04g48070 | Os04g0569100 | ROC4, Roc4 | Detail |
| C2H4g16788 | 4:24,662,482-24,663,894 | + | C1H4g21535 | CX4g035902 | LOC_Os04g48130 | Os04g0569300 | - | Detail |
| C2H4g20649 | 4:24,664,480-24,668,620 | - | C1H4g08980 | CX4g031968 | LOC_Os04g48140 | Os04g0569400 | - | Detail |
| C2H4g00953 | 4:24,680,139-24,682,701 | - | C1H4g04673 | CX4g034977 | LOC_Os04g48160 | Os04g0569900 | - | Detail |
| C2H4g17853 | 4:24,691,650-24,695,483 | - | C1H4g18526 | CX4g033784 | LOC_Os04g48170 | Os04g0570000 | CYP87A3 | Detail |
| C2H4g14427 | 4:24,713,054-24,724,810 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570500 | - | Detail |
| C2H4g22883 | 4:24,725,688-24,725,969 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570600 | - | Detail |
| C2H4g06266 | 4:24,729,155-24,733,008 | - | C1H4g03867 | CX4g033156 | LOC_Os04g48230 | Os04g0570800 | - | Detail |
| C2H4g17221 | 4:24,745,123-24,747,689 | + | C1H4g26163 | CX4g033503 | LOC_Os04g48260 | Os04g0571200 | OsSIRH2-14, OsRFPH2-14 | Detail |
| C2H4g10186 | 4:24,752,021-24,754,484 | + | C1H4g03569 | CX4g033945 | LOC_Os04g48270 | Os04g0571300 | - | Detail |
| C2H4g15919 | 4:24,775,741-24,777,423 | + | C1H4g23534 | CX4g036434 | LOC_Os04g48290 | Os04g0571600 | - | Detail |
| C2H4g00338 | 4:24,794,171-24,796,228 | + | C1H4g17435 | CX4g036388 | LOC_Os04g48310 | Os04g0571800 | - | Detail |
| C2H4g12960 | 4:24,809,241-24,809,861 | + | C1H4g06177 | CX4g036221 | LOC_Os04g48330 | Os04g0572200 | - | Detail |
| C2H4g16947 | 4:24,828,508-24,829,167 | + | C1H4g06177 | CX4g033927 | LOC_Os04g48350 | Os04g0572400 | OsDREB1E | Detail |
| C2H4g15443 | 4:24,834,789-24,837,653 | + | C1H4g03855 | - | LOC_Os04g48360 | Os04g0572500 | - | Detail |
| C2H4g29441 | 4:24,840,867-24,855,980 | + | C1H4g24679 | CX4g034848 | LOC_Os04g48370 | Os04g0572600 | OsNRPD1a, OsNRPD1 | Detail |
| C2H4g24575 | 4:24,858,227-24,862,081 | + | C1H4g25752 | CX2g023056 | LOC_Os04g48375 | Os04g0572700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030917 | 3:10,355,126-10,359,561 | - | C1H3g05314 | C2H3g10177 | LOC_Os03g20520 | Os03g0784400 | - | Detail |
| CX3g027287 | 3:10,362,284-10,368,124 | - | C1H3g24166 | C2H3g16949 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| CX3g031347 | 3:10,371,938-10,372,150 | + | - | - | - | - | - | Detail |
| CX3g026754 | 3:10,373,297-10,373,446 | + | - | - | - | - | - | Detail |
| CX3g030570 | 3:10,382,326-10,383,369 | + | C1H3g22188 | C2H3g07472 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| CX3g029278 | 3:10,384,513-10,385,238 | - | C1H3g31320 | C2H3g22893 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| CX3g025622 | 3:10,385,514-10,386,456 | + | C1H3g15973 | C2H3g22031 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| CX3g027052 | 3:10,388,597-10,392,440 | - | C1H3g10139 | C2H3g29406 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| CX3g026700 | 3:10,394,720-10,395,463 | + | C1H3g01616 | C2H3g13047 | LOC_Os03g20590 | - | - | Detail |
| CX3g029175 | 3:10,395,896-10,396,252 | - | C1H3g09864 | C2H3g25454 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| CX3g026757 | 3:10,398,650-10,402,951 | + | C1H3g20781 | C2H3g26982 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| CX3g029187 | 3:10,403,911-10,405,956 | + | C1H3g30541 | C2H3g00494 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| CX3g029676 | 3:10,406,434-10,409,892 | - | C1H3g17698 | C2H3g22567 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| CX3g026759 | 3:10,417,097-10,417,528 | - | - | - | - | - | - | Detail |
| CX3g029908 | 3:10,420,931-10,423,348 | + | C1H3g30170 | C2H3g08879 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| CX3g027559 | 3:10,427,730-10,428,846 | - | C1H3g03964 | C2H3g26182 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| CX3g027985 | 3:10,434,367-10,439,545 | + | - | C2H3g25815 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| CX3g026892 | 3:10,441,001-10,441,780 | - | C1H3g29071 | C2H3g22582 | LOC_Os03g11420 | Os03g0703100 | - | Detail |
| CX3g029181 | 3:10,442,291-10,442,446 | + | - | - | - | - | - | Detail |
| CX3g028829 | 3:10,443,622-10,448,226 | + | C1H3g04844 | C2H3g04983 | LOC_Os03g20720 | Os03g0323500 | - | Detail |