| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22655 | 4:18,351,919-18,352,857 | - | C1H4g14575 | CX4g034540 | LOC_Os04g35300 | Os04g0432600 | - | Detail |
| C2H4g20356 | 4:18,354,135-18,356,123 | - | C1H4g23042 | CX4g035650 | LOC_Os04g35305 | Os04g0432800 | - | Detail |
| C2H4g07440 | 4:18,363,696-18,364,862 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35310 | Os04g0625600 | - | Detail |
| C2H4g18419 | 4:18,367,836-18,368,936 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35370 | Os04g0625600 | - | Detail |
| C2H4g22168 | 4:18,393,411-18,398,613 | + | C1H4g18234 | CX4g032398 | LOC_Os04g35380 | Os04g0433200 | - | Detail |
| C2H4g19405 | 4:18,405,988-18,407,176 | + | C1H4g24371 | CX4g032298 | LOC_Os04g35390 | Os04g0433300 | - | Detail |
| C2H4g16542 | 4:18,415,440-18,416,284 | - | - | CX4g034124 | - | - | - | Detail |
| C2H4g19627 | 4:18,420,191-18,424,424 | - | C1H4g04051 | CX4g033528 | LOC_Os04g35410 | Os04g0433600 | - | Detail |
| C2H4g01376 | 4:18,429,634-18,439,552 | - | C1H4g09671 | CX4g032013 | LOC_Os04g35420 | Os04g0433800 | OsRecQl4 | Detail |
| C2H4g24266 | 4:18,441,437-18,447,918 | - | C1H4g26209 | CX4g032480 | LOC_Os04g35430 | Os04g0433900 | - | Detail |
| C2H4g14516 | 4:18,458,990-18,462,658 | - | C1H4g16755 | CX4g036182 | LOC_Os04g35480 | Os04g0434300 | - | Detail |
| C2H4g03670 | 4:18,463,122-18,464,800 | + | C1H4g01137 | CX4g033477 | LOC_Os04g35490 | Os04g0434400 | - | Detail |
| C2H4g25515 | 4:18,468,880-18,469,746 | - | - | CX4g033142 | LOC_Os04g35500 | Os04g0434500 | - | Detail |
| C2H4g12666 | 4:18,479,928-18,491,060 | - | C1H4g18837 | CX4g033597 | LOC_Os04g35510 | Os04g0434600 | - | Detail |
| C2H4g00913 | 4:18,493,722-18,498,080 | - | C1H4g16208 | CX4g035656 | LOC_Os04g35520 | Os04g0434800 | OsAPX7, sAPX | Detail |
| C2H4g20243 | 4:18,501,386-18,506,382 | + | C1H4g09329 | CX4g035680 | LOC_Os04g35530 | Os04g0434900 | - | Detail |
| C2H4g06857 | 4:18,510,663-18,515,273 | + | C1H4g19761 | CX4g036436 | LOC_Os04g35540 | Os04g0435100 | - | Detail |
| C2H4g27190 | 4:18,518,883-18,534,264 | - | - | - | - | - | - | Detail |
| C2H4g24818 | 4:18,535,610-18,537,887 | - | C1H4g18209 | CX4g032696 | LOC_Os04g35560 | Os04g0435500 | - | Detail |
| C2H4g14359 | 4:18,551,659-18,556,886 | + | C1H4g19177 | CX4g035624 | LOC_Os04g35570 | Os04g0435700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030917 | 3:10,355,126-10,359,561 | - | C1H3g05314 | C2H3g10177 | LOC_Os03g20520 | Os03g0784400 | - | Detail |
| CX3g027287 | 3:10,362,284-10,368,124 | - | C1H3g24166 | C2H3g16949 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| CX3g031347 | 3:10,371,938-10,372,150 | + | - | - | - | - | - | Detail |
| CX3g026754 | 3:10,373,297-10,373,446 | + | - | - | - | - | - | Detail |
| CX3g030570 | 3:10,382,326-10,383,369 | + | C1H3g22188 | C2H3g07472 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| CX3g029278 | 3:10,384,513-10,385,238 | - | C1H3g31320 | C2H3g22893 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| CX3g025622 | 3:10,385,514-10,386,456 | + | C1H3g15973 | C2H3g22031 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| CX3g027052 | 3:10,388,597-10,392,440 | - | C1H3g10139 | C2H3g29406 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| CX3g026700 | 3:10,394,720-10,395,463 | + | C1H3g01616 | C2H3g13047 | LOC_Os03g20590 | - | - | Detail |
| CX3g029175 | 3:10,395,896-10,396,252 | - | C1H3g09864 | C2H3g25454 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| CX3g026757 | 3:10,398,650-10,402,951 | + | C1H3g20781 | C2H3g26982 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| CX3g029187 | 3:10,403,911-10,405,956 | + | C1H3g30541 | C2H3g00494 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| CX3g029676 | 3:10,406,434-10,409,892 | - | C1H3g17698 | C2H3g22567 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| CX3g026759 | 3:10,417,097-10,417,528 | - | - | - | - | - | - | Detail |
| CX3g029908 | 3:10,420,931-10,423,348 | + | C1H3g30170 | C2H3g08879 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| CX3g027559 | 3:10,427,730-10,428,846 | - | C1H3g03964 | C2H3g26182 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| CX3g027985 | 3:10,434,367-10,439,545 | + | - | C2H3g25815 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| CX3g026892 | 3:10,441,001-10,441,780 | - | C1H3g29071 | C2H3g22582 | LOC_Os03g11420 | Os03g0703100 | - | Detail |
| CX3g029181 | 3:10,442,291-10,442,446 | + | - | - | - | - | - | Detail |
| CX3g028829 | 3:10,443,622-10,448,226 | + | C1H3g04844 | C2H3g04983 | LOC_Os03g20720 | Os03g0323500 | - | Detail |