| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g05844 | 9:10,283,906-10,288,529 | - | C1H9g09897 | CX9g055654 | LOC_Os09g20090 | Os09g0365900 | OsORAP1, OsAAO4 | Detail |
| C2H9g09121 | 9:10,306,961-10,308,376 | - | - | CX9g055839 | LOC_Os09g20170 | Os09g0366800 | - | Detail |
| C2H9g09091 | 9:10,321,991-10,323,487 | - | C1H9g15571 | CX9g054852 | LOC_Os09g20200 | - | - | Detail |
| C2H9g29920 | 9:10,337,303-10,338,225 | + | C1H9g02207 | CX9g056871 | LOC_Os09g20240 | Os09g0367900 | - | Detail |
| C2H9g28396 | 9:10,353,980-10,359,002 | + | - | - | - | Os09g0368250 | - | Detail |
| C2H9g14431 | 9:10,358,627-10,359,108 | - | C1H9g30662 | CX9g056709 | LOC_Os09g20260 | Os09g0368200 | - | Detail |
| C2H9g13000 | 9:10,359,249-10,360,580 | + | - | CX9g057677 | - | Os09g0368400 | - | Detail |
| C2H9g01723 | 9:10,360,086-10,361,859 | - | C1H9g30662 | CX9g056709 | LOC_Os09g20284 | Os09g0368200 | - | Detail |
| C2H9g01995 | 9:10,362,877-10,366,009 | - | C1H9g08171 | CX9g056709 | LOC_Os09g20284 | Os09g0368200 | - | Detail |
| C2H9g28312 | 9:10,368,827-10,370,862 | - | C1H9g26989 | CX9g056709 | LOC_Os09g20284 | Os09g0368200 | - | Detail |
| C2H9g01360 | 9:10,377,582-10,381,853 | - | C1H9g08171 | CX9g056709 | LOC_Os09g20284 | Os09g0368500 | PAO7, OsPAO7, OsPAO3 | Detail |
| C2H9g13990 | 9:10,384,594-10,384,809 | - | C1H9g21942 | - | - | - | - | Detail |
| C2H9g11239 | 9:10,399,165-10,404,403 | + | C1H9g07275 | CX9g057276 | LOC_Os09g20340 | Os09g0368900 | - | Detail |
| C2H9g03345 | 9:10,421,488-10,422,054 | + | C1H9g13671 | - | - | - | - | Detail |
| C2H9g15745 | 9:10,422,077-10,422,937 | + | C1H9g13671 | CX9g057652 | LOC_Os09g20350 | Os09g0369000 | OsDREB6 | Detail |
| C2H9g22049 | 9:10,445,849-10,448,187 | + | C1H9g26600 | CX9g055870 | LOC_Os09g20390 | Os09g0369400 | OsTPP7 | Detail |
| C2H9g18178 | 9:10,457,655-10,459,499 | - | C1H9g20254 | CX9g058083 | LOC_Os09g20400 | Os09g0369500 | - | Detail |
| C2H9g15437 | 9:10,479,675-10,483,826 | - | C1H9g05408 | CX9g057823 | LOC_Os09g20430 | Os09g0370200 | - | Detail |
| C2H9g01776 | 9:10,496,312-10,497,997 | + | - | CX9g057287 | LOC_Os09g20460 | Os09g0370500 | - | Detail |
| C2H9g06892 | 9:10,520,278-10,523,345 | + | C1H9g09768 | - | LOC_Os09g20480 | Os09g0371000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031095 | 3:10,226,284-10,226,817 | + | C1H3g25597 | C2H3g06773 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| CX3g029136 | 3:10,229,218-10,229,421 | - | C1H3g15118 | C2H3g08529 | - | Os03g0789600 | - | Detail |
| CX3g026975 | 3:10,229,612-10,230,133 | - | C1H3g30760 | C2H3g03703 | LOC_Os03g18220 | Os03g0293500 | Ospdc2, PDC2 | Detail |
| CX3g030494 | 3:10,235,406-10,240,169 | + | C1H3g29099 | C2H3g23539 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| CX3g028434 | 3:10,247,365-10,248,796 | + | C1H3g19829 | C2H3g28901 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| CX3g031077 | 3:10,252,327-10,253,609 | + | C1H3g23043 | C2H3g27412 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| CX3g026317 | 3:10,256,145-10,259,824 | - | C1H3g21490 | C2H3g25279 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| CX3g026506 | 3:10,271,297-10,271,446 | - | - | - | - | - | - | Detail |
| CX3g025212 | 3:10,274,255-10,276,237 | - | C1H3g25971 | C2H3g09371 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| CX3g029293 | 3:10,284,089-10,290,617 | - | C1H3g08252 | C2H3g22340 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| CX3g027693 | 3:10,292,467-10,292,682 | - | - | - | - | Os03g0752000 | - | Detail |
| CX3g029244 | 3:10,296,273-10,298,252 | + | C1H3g09342 | C2H3g01972 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| CX3g027813 | 3:10,303,231-10,303,887 | - | C1H3g07396 | C2H3g13875 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| CX3g030303 | 3:10,320,728-10,324,477 | + | C1H3g21035 | C2H3g23140 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| CX3g027683 | 3:10,327,806-10,330,574 | + | C1H3g22135 | C2H3g14660 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| CX3g026494 | 3:10,331,938-10,334,411 | + | C1H3g27273 | C2H3g12919 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| CX3g026269 | 3:10,335,259-10,335,591 | + | - | - | LOC_Os03g20480 | Os03g0321100 | - | Detail |
| CX3g029583 | 3:10,344,641-10,345,786 | + | C1H3g19861 | C2H3g01230 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| CX3g025726 | 3:10,350,007-10,350,156 | + | - | - | - | - | - | Detail |
| CX3g030418 | 3:10,353,802-10,355,059 | - | C1H3g05314 | C2H3g10177 | LOC_Os03g20520 | Os03g0321400 | - | Detail |