| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03007 | 6:991,070-996,326 | + | C1H6g21402 | CX6g042396 | LOC_Os06g03800 | Os06g0128600 | - | Detail |
| C2H6g15041 | 6:998,362-999,039 | - | C1H6g22896 | CX6g043598 | LOC_Os06g03810 | Os06g0128800 | ROD1 | Detail |
| C2H6g15913 | 6:1,002,336-1,005,563 | + | - | CX6g043137 | LOC_Os06g03820 | Os06g0129000 | - | Detail |
| C2H6g21739 | 6:1,010,338-1,013,257 | + | C1H6g24553 | CX6g043087 | LOC_Os06g03830 | Os06g0129100 | - | Detail |
| C2H6g00876 | 6:1,015,118-1,016,419 | - | - | CX6g042312 | LOC_Os06g03840 | Os06g0129200 | - | Detail |
| C2H6g06428 | 6:1,018,526-1,021,414 | - | C1H6g11331 | CX6g041241 | LOC_Os06g03850 | Os06g0129300 | - | Detail |
| C2H6g25282 | 6:1,025,384-1,032,007 | + | C1H6g29259 | CX6g042701 | LOC_Os06g03860 | Os06g0129400 | OsSPX-MFS3 | Detail |
| C2H6g21225 | 6:1,036,037-1,038,517 | - | C1H6g00193 | CX6g043110 | LOC_Os06g03910 | Os06g0129700 | OsNUDX14 | Detail |
| C2H6g26298 | 6:1,040,115-1,041,676 | + | C1H6g17530 | CX6g045939 | LOC_Os06g03920 | Os06g0129800 | - | Detail |
| C2H6g20963 | 6:1,041,832-1,045,573 | - | C1H6g17973 | CX6g041936 | LOC_Os06g03930 | Os06g0129900 | - | Detail |
| C2H6g21946 | 6:1,047,999-1,055,626 | + | C1H6g16816 | CX6g042961 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| C2H6g29452 | 6:1,068,622-1,076,045 | + | C1H6g10621 | CX6g045059 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| C2H6g19930 | 6:1,077,962-1,083,480 | - | C1H6g10956 | CX6g044073 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| C2H6g06199 | 6:1,093,955-1,097,863 | + | C1H6g25934 | CX6g042850 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| C2H6g01425 | 6:1,098,428-1,098,999 | + | C1H6g22047 | CX6g045112 | LOC_Os06g04000 | Os06g0130500 | - | Detail |
| C2H6g10031 | 6:1,099,759-1,104,110 | - | C1H6g20077 | CX6g044708 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| C2H6g17502 | 6:1,105,721-1,107,104 | - | C1H6g17787 | CX6g044104 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| C2H6g03952 | 6:1,108,573-1,109,466 | - | C1H6g00179 | CX6g042400 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| C2H6g02995 | 6:1,111,833-1,117,107 | + | C1H6g27483 | CX6g044062 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| C2H6g25218 | 6:1,134,720-1,136,828 | - | - | CX6g045583 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028739 | 3:10,036,794-10,038,740 | + | C1H3g05706 | C2H3g04215 | LOC_Os03g19980 | Os03g0314400 | - | Detail |
| CX3g029467 | 3:10,049,555-10,052,640 | + | C1H3g20485 | C2H3g25214 | LOC_Os03g19990 | Os03g0314500 | - | Detail |
| CX3g026855 | 3:10,055,092-10,055,274 | - | - | - | - | - | - | Detail |
| CX3g027957 | 3:10,057,106-10,061,627 | + | C1H3g18195 | C2H3g21031 | LOC_Os03g20010 | Os03g0314700 | - | Detail |
| CX3g027685 | 3:10,070,065-10,074,202 | - | C1H3g19914 | C2H3g06553 | LOC_Os03g20020 | Os03g0314800 | OsNIN1 | Detail |
| CX3g026874 | 3:10,077,777-10,079,061 | + | C1H3g29631 | C2H3g07740 | - | - | - | Detail |
| CX3g029724 | 3:10,092,471-10,093,926 | - | C1H3g14664 | C2H3g15105 | LOC_Os03g20090 | Os03g0315400 | OsMYB2 | Detail |
| CX3g026905 | 3:10,109,566-10,109,772 | + | - | - | - | - | - | Detail |
| CX3g031333 | 3:10,117,436-10,121,424 | - | C1H3g20197 | C2H3g14730 | LOC_Os03g20100 | Os03g0315800 | ASL4 | Detail |
| CX3g026763 | 3:10,133,250-10,134,565 | + | C1H3g21365 | C2H3g02965 | LOC_Os03g20120 | Os03g0316200 | OsGolS1 | Detail |
| CX3g029632 | 3:10,136,299-10,136,472 | + | - | - | - | Os02g0188201 | - | Detail |
| CX3g027966 | 3:10,145,607-10,148,259 | + | C1H3g25401 | C2H3g20528 | LOC_Os03g20170 | Os03g0316900 | OsABCI16 | Detail |
| CX3g028132 | 3:10,152,219-10,155,814 | + | C1H3g25351 | C2H3g18428 | LOC_Os03g20180 | Os03g0317000 | - | Detail |
| CX3g030095 | 3:10,157,668-10,159,788 | + | C1H3g17147 | C2H3g29051 | LOC_Os03g20190 | Os03g0317100 | - | Detail |
| CX3g028796 | 3:10,164,525-10,166,279 | + | C1H3g11404 | C2H3g17176 | LOC_Os03g20210 | Os03g0317300 | - | Detail |
| CX3g026260 | 3:10,166,908-10,168,209 | + | C1H3g16001 | C2H3g05954 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| CX3g025491 | 3:10,185,507-10,186,718 | + | C1H3g07890 | C2H3g08312 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| CX3g028957 | 3:10,193,759-10,195,053 | + | C1H3g20479 | C2H3g29183 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| CX3g024974 | 3:10,196,697-10,202,396 | - | C1H3g31254 | C2H3g10315 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| CX3g025701 | 3:10,203,208-10,207,040 | - | C1H3g27797 | C2H3g15586 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |