| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24513 | 2:7,115,630-7,120,292 | - | C1H2g19802 | CX2g023765 | LOC_Os02g14120 | Os02g0236100 | Docs1, OsSERL4, OsBAK1-9 | Detail |
| C2H2g28619 | 2:7,124,038-7,128,823 | - | C1H2g05695 | CX2g019107 | LOC_Os02g14130 | Os02g0236200 | OsGSK3 | Detail |
| C2H2g15088 | 2:7,153,911-7,154,294 | + | C1H2g16655 | - | - | - | - | Detail |
| C2H2g00866 | 2:7,161,052-7,163,469 | + | C1H2g28602 | CX2g020322 | LOC_Os02g14160 | Os02g0236600 | - | Detail |
| C2H2g17543 | 2:7,172,578-7,174,043 | + | C1H2g19755 | CX2g019362 | LOC_Os02g14170 | Os02g0236800 | - | Detail |
| C2H2g01979 | 2:7,183,768-7,186,868 | - | C1H2g20748 | CX2g019997 | LOC_Os02g14190 | Os02g0237100 | OsACL5 | Detail |
| C2H2g06276 | 2:7,270,815-7,275,171 | - | C1H2g02975 | CX2g023437 | LOC_Os02g14290 | Os02g0238500 | - | Detail |
| C2H2g02823 | 2:7,276,673-7,277,141 | - | C1H2g07970 | - | - | - | - | Detail |
| C2H2g11425 | 2:7,392,814-7,393,736 | - | C1H2g00121 | CX2g019953 | - | - | - | Detail |
| C2H2g18936 | 2:7,430,644-7,432,797 | + | C1H2g18272 | - | - | - | - | Detail |
| C2H2g18657 | 2:7,453,194-7,454,253 | + | C1H2g16166 | CX2g022670 | LOC_Os02g14160 | Os02g0240100 | OsPrx30 | Detail |
| C2H2g27805 | 2:7,463,226-7,464,739 | + | C1H2g04310 | CX2g021317 | LOC_Os02g14160 | Os02g0240300 | - | Detail |
| C2H2g30471 | 2:7,474,140-7,475,342 | + | C1H2g30635 | CX2g021564 | LOC_Os02g14160 | Os02g0240100 | OsPrx30 | Detail |
| C2H2g09176 | 2:7,486,512-7,489,728 | - | C1H2g28389 | CX2g021126 | LOC_Os02g14480 | Os02g0241100 | - | Detail |
| C2H2g11649 | 2:7,502,988-7,506,143 | + | C1H2g17563 | CX2g021263 | LOC_Os02g14490 | Os02g0241200 | - | Detail |
| C2H2g23767 | 2:7,510,452-7,522,628 | + | C1H2g08870 | CX2g021418 | LOC_Os02g14530 | Os02g0241600 | - | Detail |
| C2H2g00070 | 2:7,523,658-7,525,088 | - | C1H2g13786 | CX2g021918 | LOC_Os02g14540 | Os02g0242100 | - | Detail |
| C2H2g11535 | 2:7,531,609-7,533,063 | - | C1H2g29589 | CX2g023564 | LOC_Os02g14570 | Os02g0242100 | - | Detail |
| C2H2g09750 | 2:7,539,089-7,540,543 | + | C1H2g25751 | CX2g023449 | LOC_Os02g14590 | Os02g0242550 | - | Detail |
| C2H2g14127 | 2:7,547,419-7,548,879 | + | C1H2g25751 | CX2g023449 | LOC_Os02g14590 | Os02g0242550 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031316 | 3:9,732,596-9,739,471 | - | C1H3g00240 | C2H3g03655 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| CX3g025615 | 3:9,741,132-9,741,661 | + | C1H3g04726 | C2H3g06844 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| CX3g024948 | 3:9,742,890-9,745,363 | + | C1H3g19730 | C2H3g23976 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| CX3g029346 | 3:9,746,959-9,749,596 | - | C1H3g14154 | C2H3g08220 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| CX3g025603 | 3:9,751,021-9,757,592 | - | C1H3g03825 | C2H3g05621 | LOC_Os03g19520 | Os03g0308200 | - | Detail |
| CX3g029899 | 3:9,761,839-9,765,652 | + | C1H3g14624 | C2H3g16168 | LOC_Os03g19530 | Os03g0308500 | - | Detail |
| CX3g026525 | 3:9,766,690-9,768,851 | + | - | C2H3g16168 | LOC_Os08g23280 | - | - | Detail |
| CX3g025445 | 3:9,771,423-9,773,023 | + | C1H3g01414 | C2H3g07392 | LOC_Os03g19550 | Os03g0308700 | - | Detail |
| CX3g030908 | 3:9,773,807-9,778,694 | - | C1H3g19377 | C2H3g00056 | LOC_Os03g19560 | Os03g0308800 | - | Detail |
| CX3g028131 | 3:9,779,936-9,787,837 | - | C1H3g11990 | C2H3g29613 | LOC_Os03g19570 | Os03g0308900 | - | Detail |
| CX3g027111 | 3:9,789,105-9,793,300 | - | C1H3g12362 | C2H3g04332 | LOC_Os03g19580 | Os03g0309000 | - | Detail |
| CX3g027710 | 3:9,801,426-9,808,862 | + | C1H3g01579 | C2H3g27208 | LOC_Os03g19590 | Os03g0309200 | PHYB, phyB | Detail |
| CX3g030356 | 3:9,818,109-9,818,333 | - | - | - | - | Os03g0309250 | - | Detail |
| CX3g026554 | 3:9,820,751-9,822,354 | - | C1H3g14051 | C2H3g16987 | LOC_Os03g19610 | Os03g0309400 | OsPME1 | Detail |
| CX3g025824 | 3:9,824,455-9,824,955 | - | C1H3g10254 | C2H3g05143 | LOC_Os03g19630 | Os03g0309600 | Os2R_MYB35 | Detail |
| CX3g028766 | 3:9,859,254-9,859,475 | + | C1H3g11555 | C2H3g16697 | - | - | - | Detail |
| CX3g028595 | 3:9,861,357-9,863,424 | + | C1H3g27332 | C2H3g12766 | LOC_Os03g19650 | Os03g0309800 | - | Detail |
| CX3g031099 | 3:9,868,879-9,869,373 | + | - | - | - | - | - | Detail |
| CX3g030795 | 3:9,872,568-9,874,521 | + | C1H3g10972 | C2H3g11631 | LOC_Os03g19670 | Os03g0310000 | - | Detail |
| CX3g026374 | 3:9,877,544-9,879,324 | + | C1H3g01286 | C2H3g08022 | LOC_Os03g19680 | Os03g0310400 | - | Detail |