| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15970 | 1:37,218,276-37,226,454 | + | C1H1g28344 | CX1g006787 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| C2H1g26616 | 1:37,229,588-37,235,607 | + | C1H1g14812 | CX1g000308 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| C2H1g27034 | 1:37,239,661-37,243,513 | - | C1H1g10733 | CX1g006331 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| C2H1g14926 | 1:37,252,177-37,253,679 | - | C1H1g01146 | CX1g001591 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| C2H1g03834 | 1:37,258,610-37,260,906 | - | C1H1g04628 | CX1g003263 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| C2H1g02375 | 1:37,272,687-37,273,904 | + | C1H1g09009 | CX1g000799 | LOC_Os01g72460 | Os01g0954000 | - | Detail |
| C2H1g05250 | 1:37,279,296-37,281,017 | + | C1H1g12859 | CX1g002521 | LOC_Os01g72480 | Os01g0954400 | OsPIE1 | Detail |
| C2H1g18488 | 1:37,292,631-37,294,720 | - | C1H1g06637 | CX1g002910 | LOC_Os01g72490 | Os01g0954500 | - | Detail |
| C2H1g13785 | 1:37,319,802-37,323,813 | - | C1H1g29256 | CX1g005638 | LOC_Os01g72520 | Os01g0955000 | - | Detail |
| C2H1g03342 | 1:37,338,498-37,341,273 | + | C1H1g30539 | CX1g001552 | LOC_Os01g72560 | Os01g0955600 | - | Detail |
| C2H1g18643 | 1:37,342,825-37,343,286 | + | C1H1g11819 | CX1g000933 | LOC_Os01g72570 | Os01g0955700 | OsCLT1 | Detail |
| C2H1g26218 | 1:37,345,466-37,350,739 | + | C1H1g25568 | CX1g000933 | LOC_Os01g72570 | Os01g0955700 | OsCLT1 | Detail |
| C2H1g11887 | 1:37,402,257-37,412,323 | + | C1H1g11358 | CX1g001036 | LOC_Os01g72700 | Os01g0957100 | - | Detail |
| C2H1g06905 | 1:37,415,791-37,419,340 | + | C1H1g31774 | CX1g006954 | LOC_Os01g72710 | Os01g0957200 | - | Detail |
| C2H1g22102 | 1:37,435,247-37,437,295 | + | C1H1g07051 | CX1g003252 | LOC_Os01g72740 | Os01g0957600 | - | Detail |
| C2H1g10277 | 1:37,440,653-37,442,630 | + | C1H1g25546 | CX1g003252 | LOC_Os01g72760 | Os01g0957800 | - | Detail |
| C2H1g17125 | 1:37,445,235-37,456,135 | + | C1H1g22585 | CX1g005071 | LOC_Os01g72780 | Os01g0957900 | - | Detail |
| C2H1g30473 | 1:37,457,446-37,460,589 | + | C1H1g03012 | CX1g004960 | LOC_Os01g72790 | Os01g0958000 | - | Detail |
| C2H1g28809 | 1:37,462,693-37,465,294 | - | C1H1g15701 | CX1g006015 | LOC_Os01g72800 | Os01g0958100 | - | Detail |
| C2H1g09202 | 1:37,470,481-37,473,430 | + | C1H1g12147 | CX1g003953 | LOC_Os01g72820 | Os01g0958400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028201 | 3:9,617,348-9,618,220 | - | C1H3g18796 | C2H3g28502 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| CX3g030535 | 3:9,618,993-9,625,042 | + | C1H3g22639 | C2H3g12913 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| CX3g026875 | 3:9,625,774-9,626,136 | - | - | - | - | Os03g0305550 | - | Detail |
| CX3g026844 | 3:9,626,221-9,627,361 | + | C1H3g06291 | C2H3g24123 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| CX3g029447 | 3:9,628,306-9,631,055 | + | C1H3g09918 | C2H3g29234 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| CX3g025751 | 3:9,631,773-9,633,224 | - | C1H3g15276 | C2H3g25404 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| CX3g029664 | 3:9,644,621-9,645,970 | + | C1H3g04998 | C2H3g04492 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| CX3g028723 | 3:9,646,811-9,664,007 | - | C1H3g22410 | C2H3g27650 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| CX3g027549 | 3:9,666,552-9,677,738 | - | C1H3g02755 | C2H3g07435 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| CX3g026074 | 3:9,686,358-9,686,879 | + | C1H3g18574 | C2H3g20582 | LOC_Os03g19370 | Os03g0239400 | - | Detail |
| CX3g027392 | 3:9,690,199-9,690,585 | + | C1H3g08148 | C2H3g07871 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| CX3g025960 | 3:9,691,238-9,693,331 | - | C1H3g23949 | C2H3g26352 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| CX3g025770 | 3:9,693,526-9,695,419 | + | C1H3g18672 | C2H3g08753 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| CX3g025641 | 3:9,697,411-9,704,107 | + | C1H3g26919 | C2H3g28158 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| CX3g028955 | 3:9,706,391-9,707,422 | + | C1H3g07326 | C2H3g27859 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| CX3g027893 | 3:9,711,701-9,712,696 | - | C1H3g08713 | C2H3g23633 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| CX3g027748 | 3:9,719,247-9,719,741 | + | C1H3g12875 | C2H3g12347 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g025182 | 3:9,721,987-9,723,195 | + | C1H3g10945 | C2H3g00214 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g028724 | 3:9,723,610-9,726,883 | + | C1H3g01117 | C2H3g27228 | LOC_Os03g19462 | - | - | Detail |
| CX3g026010 | 3:9,729,669-9,731,960 | + | C1H3g07984 | C2H3g27622 | LOC_Os03g19470 | Os03g0307700 | - | Detail |