| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g25595 | 9:11,946,687-11,956,579 | - | C1H9g03905 | CX9g057906 | LOC_Os09g23760 | Os09g0402533 | - | Detail |
| C2H9g08460 | 9:11,961,058-11,965,290 | - | C1H9g17416 | CX9g056256 | LOC_Os09g23780 | Os09g0403000 | - | Detail |
| C2H9g10325 | 9:11,991,185-11,993,413 | - | C1H9g09430 | CX9g054957 | LOC_Os09g23820 | Os09g0403300 | CYP735A4 | Detail |
| C2H9g24241 | 9:12,070,492-12,074,440 | + | C1H9g24650 | CX9g055965 | LOC_Os09g24200 | Os09g0407200 | - | Detail |
| C2H9g02820 | 9:12,077,052-12,082,880 | - | C1H9g23904 | CX9g057203 | LOC_Os09g24210 | Os09g0407300 | - | Detail |
| C2H9g29912 | 9:12,088,819-12,097,627 | + | C1H9g02293 | CX9g055864 | LOC_Os09g24220 | Os09g0407600 | OsMSH6 | Detail |
| C2H9g01717 | 9:12,098,560-12,100,597 | - | C1H9g08629 | CX9g056314 | LOC_Os09g24230 | Os09g0407700 | - | Detail |
| C2H9g04820 | 9:12,105,365-12,110,209 | - | C1H9g08004 | CX9g055255 | LOC_Os09g24250 | Os09g0407900 | - | Detail |
| C2H9g21364 | 9:12,115,252-12,127,451 | + | C1H9g20631 | CX9g056605 | LOC_Os09g24260 | Os09g0408000 | - | Detail |
| C2H9g07349 | 9:12,146,594-12,150,689 | + | C1H9g14259 | CX10g008425 | LOC_Os09g24290 | Os09g0408300 | - | Detail |
| C2H9g01448 | 9:12,167,118-12,167,807 | + | C1H9g31260 | CX9g055135 | LOC_Os09g24310 | Os09g0408550 | - | Detail |
| C2H9g08954 | 9:12,168,443-12,171,174 | - | C1H9g05602 | CX9g058200 | LOC_Os09g24320 | Os09g0408600 | - | Detail |
| C2H9g03900 | 9:12,177,093-12,178,180 | + | C1H9g31476 | CX9g055752 | LOC_Os09g24330 | Os09g0551201 | SDK1 | Detail |
| C2H9g12250 | 9:12,185,495-12,186,697 | + | C1H9g18300 | CX9g057158 | LOC_Os09g24330 | Os09g0408900 | - | Detail |
| C2H9g10480 | 9:12,208,313-12,224,837 | + | C1H9g04735 | CX9g057897 | LOC_Os09g24440 | Os09g0410300 | TAF2 | Detail |
| C2H9g06736 | 9:12,226,374-12,234,026 | + | C1H9g12574 | CX9g055674 | - | Os09g0410400 | - | Detail |
| C2H9g10864 | 9:12,259,086-12,259,848 | + | C1H9g03911 | CX9g056790 | - | - | - | Detail |
| C2H9g24788 | 9:12,264,548-12,266,942 | - | C1H9g20900 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C2H9g22733 | 9:12,276,692-12,277,856 | + | C1H9g20141 | CX9g055159 | - | - | - | Detail |
| C2H9g26695 | 9:12,280,841-12,281,761 | - | C1H9g04476 | CX9g057630 | LOC_Os09g28820 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028201 | 3:9,617,348-9,618,220 | - | C1H3g18796 | C2H3g28502 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| CX3g030535 | 3:9,618,993-9,625,042 | + | C1H3g22639 | C2H3g12913 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| CX3g026875 | 3:9,625,774-9,626,136 | - | - | - | - | Os03g0305550 | - | Detail |
| CX3g026844 | 3:9,626,221-9,627,361 | + | C1H3g06291 | C2H3g24123 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| CX3g029447 | 3:9,628,306-9,631,055 | + | C1H3g09918 | C2H3g29234 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| CX3g025751 | 3:9,631,773-9,633,224 | - | C1H3g15276 | C2H3g25404 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| CX3g029664 | 3:9,644,621-9,645,970 | + | C1H3g04998 | C2H3g04492 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| CX3g028723 | 3:9,646,811-9,664,007 | - | C1H3g22410 | C2H3g27650 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| CX3g027549 | 3:9,666,552-9,677,738 | - | C1H3g02755 | C2H3g07435 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| CX3g026074 | 3:9,686,358-9,686,879 | + | C1H3g18574 | C2H3g20582 | LOC_Os03g19370 | Os03g0239400 | - | Detail |
| CX3g027392 | 3:9,690,199-9,690,585 | + | C1H3g08148 | C2H3g07871 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| CX3g025960 | 3:9,691,238-9,693,331 | - | C1H3g23949 | C2H3g26352 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| CX3g025770 | 3:9,693,526-9,695,419 | + | C1H3g18672 | C2H3g08753 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| CX3g025641 | 3:9,697,411-9,704,107 | + | C1H3g26919 | C2H3g28158 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| CX3g028955 | 3:9,706,391-9,707,422 | + | C1H3g07326 | C2H3g27859 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| CX3g027893 | 3:9,711,701-9,712,696 | - | C1H3g08713 | C2H3g23633 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| CX3g027748 | 3:9,719,247-9,719,741 | + | C1H3g12875 | C2H3g12347 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g025182 | 3:9,721,987-9,723,195 | + | C1H3g10945 | C2H3g00214 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g028724 | 3:9,723,610-9,726,883 | + | C1H3g01117 | C2H3g27228 | LOC_Os03g19462 | - | - | Detail |
| CX3g026010 | 3:9,729,669-9,731,960 | + | C1H3g07984 | C2H3g27622 | LOC_Os03g19470 | Os03g0307700 | - | Detail |