| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g05526 | 5:23,736,338-23,739,465 | + | C1H5g00985 | CX5g038165 | LOC_Os05g49300 | Os05g0568100 | - | Detail |
| C2H5g04009 | 5:23,742,336-23,743,886 | + | C1H5g09631 | CX5g036842 | LOC_Os05g49310 | Os05g0568200 | Os2R_MYB61 | Detail |
| C2H5g09227 | 5:23,745,288-23,745,821 | - | C1H5g25001 | CX5g039631 | LOC_Os05g49320 | Os05g0568300 | - | Detail |
| C2H5g10434 | 5:23,752,496-23,753,203 | + | C1H5g09281 | CX5g038436 | LOC_Os05g49350 | Os05g0568600 | - | Detail |
| C2H5g00779 | 5:23,755,879-23,756,652 | + | C1H5g06213 | CX5g038804 | LOC_Os05g49370 | Os05g0568800 | - | Detail |
| C2H5g19384 | 5:23,760,248-23,763,791 | - | C1H5g26494 | CX5g039987 | LOC_Os05g49380 | Os05g0568900 | - | Detail |
| C2H5g03690 | 5:23,765,575-23,766,966 | + | C1H5g12766 | CX5g039827 | LOC_Os05g49400 | Os05g0569100 | - | Detail |
| C2H5g19196 | 5:23,771,324-23,772,274 | + | C1H5g17667 | CX5g037902 | LOC_Os05g49410 | Os05g0569200 | - | Detail |
| C2H5g28987 | 5:23,775,543-23,780,979 | + | C1H5g15556 | CX5g036828 | LOC_Os05g49420 | Os05g0569300 | - | Detail |
| C2H5g03335 | 5:23,784,420-23,786,547 | + | C1H5g04196 | CX5g040312 | LOC_Os05g49430 | Os05g0569400 | - | Detail |
| C2H5g15224 | 5:23,787,138-23,787,946 | + | C1H5g30048 | CX5g037007 | LOC_Os05g49440 | Os05g0569500 | - | Detail |
| C2H5g09955 | 5:23,793,412-23,794,379 | + | C1H11g02939 | CX5g037778 | LOC_Os12g36430 | - | - | Detail |
| C2H5g07371 | 5:23,802,332-23,807,245 | - | C1H5g08515 | CX5g040294 | LOC_Os05g49460 | Os05g0569700 | - | Detail |
| C2H5g10887 | 5:23,807,760-23,808,824 | - | C1H8g13722 | CX5g037998 | LOC_Os05g49470 | Os05g0569800 | - | Detail |
| C2H5g01826 | 5:23,810,640-23,821,049 | + | C1H5g11632 | CX5g037511 | LOC_Os05g49480 | Os05g0569900 | - | Detail |
| C2H5g21108 | 5:23,828,210-23,829,475 | + | C1H5g05131 | CX5g039576 | LOC_Os05g49490 | Os05g0570200 | - | Detail |
| C2H5g18929 | 5:23,843,647-23,844,858 | - | C1H5g05622 | CX5g039268 | LOC_Os05g49510 | Os05g0570350 | - | Detail |
| C2H5g20762 | 5:23,846,561-23,852,313 | + | C1H5g08515 | CX5g038483 | LOC_Os05g49520 | Os05g0570400 | - | Detail |
| C2H5g25686 | 5:23,854,333-23,855,520 | + | C1H5g12265 | CX5g039566 | LOC_Os05g49530 | Os05g0320100 | - | Detail |
| C2H5g07154 | 5:23,867,356-23,867,984 | - | C1H5g24631 | CX5g038604 | LOC_Os05g49580 | Os05g0570900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028201 | 3:9,617,348-9,618,220 | - | C1H3g18796 | C2H3g28502 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| CX3g030535 | 3:9,618,993-9,625,042 | + | C1H3g22639 | C2H3g12913 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| CX3g026875 | 3:9,625,774-9,626,136 | - | - | - | - | Os03g0305550 | - | Detail |
| CX3g026844 | 3:9,626,221-9,627,361 | + | C1H3g06291 | C2H3g24123 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| CX3g029447 | 3:9,628,306-9,631,055 | + | C1H3g09918 | C2H3g29234 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| CX3g025751 | 3:9,631,773-9,633,224 | - | C1H3g15276 | C2H3g25404 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| CX3g029664 | 3:9,644,621-9,645,970 | + | C1H3g04998 | C2H3g04492 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| CX3g028723 | 3:9,646,811-9,664,007 | - | C1H3g22410 | C2H3g27650 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| CX3g027549 | 3:9,666,552-9,677,738 | - | C1H3g02755 | C2H3g07435 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| CX3g026074 | 3:9,686,358-9,686,879 | + | C1H3g18574 | C2H3g20582 | LOC_Os03g19370 | Os03g0239400 | - | Detail |
| CX3g027392 | 3:9,690,199-9,690,585 | + | C1H3g08148 | C2H3g07871 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| CX3g025960 | 3:9,691,238-9,693,331 | - | C1H3g23949 | C2H3g26352 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| CX3g025770 | 3:9,693,526-9,695,419 | + | C1H3g18672 | C2H3g08753 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| CX3g025641 | 3:9,697,411-9,704,107 | + | C1H3g26919 | C2H3g28158 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| CX3g028955 | 3:9,706,391-9,707,422 | + | C1H3g07326 | C2H3g27859 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| CX3g027893 | 3:9,711,701-9,712,696 | - | C1H3g08713 | C2H3g23633 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| CX3g027748 | 3:9,719,247-9,719,741 | + | C1H3g12875 | C2H3g12347 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g025182 | 3:9,721,987-9,723,195 | + | C1H3g10945 | C2H3g00214 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| CX3g028724 | 3:9,723,610-9,726,883 | + | C1H3g01117 | C2H3g27228 | LOC_Os03g19462 | - | - | Detail |
| CX3g026010 | 3:9,729,669-9,731,960 | + | C1H3g07984 | C2H3g27622 | LOC_Os03g19470 | Os03g0307700 | - | Detail |