| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g01608 | 6:1,633,644-1,634,261 | - | C2H6g02034 | - | LOC_Os06g05010 | Os06g0142200 | - | Detail |
| C1H6g04172 | 6:1,637,651-1,638,230 | - | C2H6g13986 | - | LOC_Os06g04990 | Os06g0142350 | - | Detail |
| C1H6g19864 | 6:1,640,981-1,645,292 | + | C2H6g02748 | CX6g043146 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| C1H6g27997 | 6:1,646,093-1,649,231 | + | C2H6g19975 | CX6g044459 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| C1H6g15081 | 6:1,650,339-1,650,976 | - | C2H6g10296 | - | LOC_Os06g04990 | Os06g0142200 | - | Detail |
| C1H6g30995 | 6:1,655,206-1,655,732 | - | C2H6g29967 | - | LOC_Os06g05000 | Os06g0142300 | - | Detail |
| C1H6g18923 | 6:1,662,892-1,663,470 | - | C2H6g10296 | - | LOC_Os06g05020 | Os06g0142400 | - | Detail |
| C1H6g25792 | 6:1,668,611-1,672,061 | + | C2H6g07918 | CX6g041298 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| C1H6g15035 | 6:1,675,950-1,680,510 | - | C2H6g07121 | CX6g042388 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| C1H6g04865 | 6:1,684,897-1,687,376 | - | C2H6g12414 | CX6g043519 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| C1H6g09936 | 6:1,688,680-1,691,204 | + | C2H6g05717 | CX6g045531 | LOC_Os06g05090 | Os06g0142800 | OsPRMT10 | Detail |
| C1H6g01773 | 6:1,691,773-1,697,461 | - | C2H6g27696 | CX6g043223 | LOC_Os06g05100 | Os06g0142900 | OsDXS2 | Detail |
| C1H6g13101 | 6:1,697,700-1,700,103 | + | C2H6g20262 | CX6g045678 | LOC_Os06g05110 | Os06g0143000 | OsFe-SOD, OsFe-SODb | Detail |
| C1H6g08887 | 6:1,702,916-1,703,798 | - | C2H6g07630 | - | LOC_Os06g05120 | Os06g0143100 | - | Detail |
| C1H6g01641 | 6:1,714,758-1,719,677 | + | C2H6g14442 | CX6g043065 | LOC_Os06g05130 | Os06g0143400 | - | Detail |
| C1H6g31651 | 6:1,723,299-1,723,532 | - | C2H6g01158 | CX6g042547 | - | - | - | Detail |
| C1H6g24178 | 6:1,727,648-1,731,746 | - | C2H6g17308 | CX6g041583 | - | Os06g0143600 | - | Detail |
| C1H6g05280 | 6:1,733,640-1,739,606 | - | C2H6g02577 | CX6g045411 | LOC_Os06g05160 | Os06g0143700 | SPDT | Detail |
| C1H6g24501 | 6:1,756,369-1,765,388 | - | C2H6g04880 | CX6g044303 | LOC_Os06g05180 | Os06g0143900 | - | Detail |
| C1H6g25118 | 6:1,765,665-1,770,041 | + | C2H6g00113 | CX6g041208 | LOC_Os06g05190 | Os06g0144000 | OsXRCC1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004485 | 1:14,420,974-14,421,255 | + | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g002980 | 1:14,426,787-14,427,953 | + | C1H1g23587 | C2H1g17662 | LOC_Os01g28300 | Os01g0380800 | - | Detail |
| CX1g002086 | 1:14,435,251-14,435,463 | - | - | - | - | - | - | Detail |
| CX1g005354 | 1:14,455,665-14,455,820 | - | - | C2H2g02098 | LOC_Os01g28370 | Os02g0711400 | - | Detail |
| CX1g002662 | 1:14,464,227-14,464,676 | + | - | - | LOC_Os01g28450 | Os01g0382000 | PR1, OsPR1b | Detail |
| CX1g000153 | 1:14,484,977-14,489,080 | + | C1H1g23029 | C2H1g10391 | LOC_Os01g28474 | Os01g0382200 | - | Detail |
| CX1g002531 | 1:14,491,916-14,492,284 | + | - | - | - | - | - | Detail |
| CX1g006905 | 1:14,494,781-14,495,224 | - | - | - | LOC_Os01g28500 | Os01g0382400 | - | Detail |
| CX1g003230 | 1:14,496,315-14,505,376 | - | - | C2H1g07235 | - | Os01g0382450 | - | Detail |
| CX1g002317 | 1:14,506,074-14,506,223 | + | - | - | - | - | - | Detail |
| CX1g000257 | 1:14,508,936-14,509,091 | + | C1H1g01971 | - | - | - | - | Detail |
| CX1g006631 | 1:14,510,092-14,511,214 | - | C1H1g15462 | C2H1g19341 | LOC_Os01g28510 | Os01g0382500 | - | Detail |
| CX1g002545 | 1:14,512,771-14,513,964 | + | C1H1g15462 | C2H1g19341 | LOC_Os01g28520 | Os01g0509900 | - | Detail |
| CX1g004931 | 1:14,523,506-14,528,534 | + | C1H1g28798 | C2H1g24156 | LOC_Os01g28540 | Os01g0382700 | - | Detail |
| CX1g006508 | 1:14,530,122-14,530,310 | - | C1H1g19876 | C2H1g28719 | LOC_Os01g28570 | Os01g0390600 | - | Detail |
| CX1g004147 | 1:14,534,462-14,536,827 | - | C1H1g04405 | C2H1g26525 | LOC_Os01g28600 | Os01g0383100 | - | Detail |
| CX1g001135 | 1:14,545,663-14,545,830 | - | - | - | LOC_Os01g28970 | Os04g0197350 | - | Detail |
| CX1g004146 | 1:14,546,829-14,547,224 | + | - | - | - | - | - | Detail |
| CX1g006936 | 1:14,606,050-14,612,522 | + | C1H1g04143 | C2H1g20117 | LOC_Os01g28680 | Os01g0383700 | - | Detail |
| CX1g004389 | 1:14,624,090-14,624,311 | - | - | - | - | - | - | Detail |