| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01356 | 1:22,547,149-22,552,418 | + | C1H1g08197 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C2H1g12475 | 1:22,555,116-22,555,352 | + | - | - | LOC_Os01g43880 | Os01g0629500 | - | Detail |
| C2H1g02903 | 1:22,558,803-22,559,798 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g15801 | 1:22,566,740-22,567,108 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g07937 | 1:22,570,471-22,576,655 | - | C1H1g14568 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C2H1g22336 | 1:22,609,633-22,616,484 | + | C1H1g00799 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C2H1g25630 | 1:22,617,364-22,620,467 | + | C1H1g26941 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C2H1g14517 | 1:22,637,435-22,643,979 | + | C1H1g05926 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| C2H1g24347 | 1:22,651,516-22,652,365 | + | C1H1g08811 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C2H1g14152 | 1:22,675,518-22,679,990 | + | C1H1g07009 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C2H1g16370 | 1:22,684,091-22,692,095 | + | C1H1g05320 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C2H1g06740 | 1:22,707,438-22,709,297 | + | C1H1g12869 | - | - | - | - | Detail |
| C2H1g03548 | 1:22,722,911-22,723,426 | - | C1H1g13707 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C2H1g23506 | 1:22,728,196-22,734,469 | + | C1H1g09519 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C2H1g25610 | 1:22,736,618-22,740,433 | + | C1H1g25629 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C2H1g21259 | 1:22,742,692-22,745,124 | + | C1H1g17417 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C2H1g13154 | 1:22,750,032-22,751,941 | + | C1H1g26792 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C2H1g30459 | 1:22,755,586-22,762,743 | - | C1H1g26567 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C2H1g20909 | 1:22,774,885-22,776,872 | - | C1H1g01839 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C2H1g10174 | 1:22,778,406-22,779,964 | - | C1H1g04340 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025499 | 3:9,430,344-9,435,923 | - | C1H3g15707 | C2H3g22040 | LOC_Os03g18980 | Os03g0301800 | - | Detail |
| CX3g025669 | 3:9,440,978-9,441,178 | + | - | - | - | Os07g0616100 | - | Detail |
| CX3g025566 | 3:9,445,942-9,446,556 | + | C1H3g00497 | C2H3g24219 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| CX3g029358 | 3:9,455,464-9,458,675 | + | C1H3g25691 | C2H3g16033 | LOC_Os03g19020 | Os03g0302200 | OsHIRP1 | Detail |
| CX3g025355 | 3:9,464,412-9,465,842 | + | C1H3g01186 | C2H3g22160 | LOC_Os03g19040 | Os03g0302500 | - | Detail |
| CX3g031208 | 3:9,467,310-9,468,293 | + | C1H3g04602 | C2H3g04749 | LOC_Os03g19059 | Os03g0302700 | - | Detail |
| CX3g027498 | 3:9,472,317-9,472,964 | + | C1H3g22154 | C2H3g01569 | LOC_Os03g19070 | Os03g0302800 | - | Detail |
| CX3g028164 | 3:9,473,537-9,474,225 | + | - | - | - | - | - | Detail |
| CX3g029770 | 3:9,487,169-9,491,108 | + | C1H3g20481 | C2H3g02069 | LOC_Os03g19080 | Os03g0302900 | SSD1 | Detail |
| CX3g030525 | 3:9,495,144-9,496,217 | + | C1H3g20097 | C2H3g07365 | LOC_Os03g19090 | Os03g0303100 | - | Detail |
| CX3g027281 | 3:9,504,807-9,510,732 | - | C1H3g25874 | C2H3g09593 | LOC_Os03g19120 | Os03g0303500 | OsP1 | Detail |
| CX3g030696 | 3:9,525,809-9,529,727 | + | - | - | - | - | - | Detail |
| CX3g028949 | 3:9,531,318-9,532,138 | - | C1H3g30781 | C2H3g00606 | LOC_Os03g19170 | Os03g0304100 | - | Detail |
| CX3g029000 | 3:9,532,786-9,533,725 | - | - | - | LOC_Os03g19180 | - | - | Detail |
| CX3g027589 | 3:9,535,308-9,542,201 | + | C1H3g08647 | C2H3g12534 | LOC_Os03g19190 | Os03g0304400 | - | Detail |
| CX3g026232 | 3:9,556,025-9,558,660 | - | C1H3g21470 | C2H3g09070 | LOC_Os03g19200 | Os03g0304500 | - | Detail |
| CX3g026365 | 3:9,594,225-9,597,878 | - | C1H3g10550 | C2H3g11777 | LOC_Os03g19240 | Os03g0305000 | - | Detail |
| CX3g028640 | 3:9,600,783-9,604,102 | - | C1H3g05747 | C2H3g17079 | LOC_Os03g19250 | Os03g0305100 | - | Detail |
| CX3g029782 | 3:9,608,786-9,609,424 | - | C1H3g00125 | C2H3g13465 | LOC_Os03g19260 | Os03g0305200 | - | Detail |
| CX3g031212 | 3:9,614,158-9,614,349 | - | - | - | - | - | - | Detail |