| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14587 | 4:25,910,918-25,914,065 | + | C1H4g08529 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C2H4g10163 | 4:25,920,589-25,923,939 | + | C1H4g06047 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C2H4g28892 | 4:25,929,260-25,931,882 | + | C1H4g02149 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C2H4g23843 | 4:25,934,133-25,937,592 | + | C1H4g05496 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C2H4g13606 | 4:25,939,410-25,942,239 | + | C1H4g28441 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C2H4g26740 | 4:25,943,074-25,945,753 | - | C1H4g06669 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C2H4g23664 | 4:25,951,331-25,951,831 | + | - | CX4g032903 | LOC_Os04g50990 | Os04g0598200 | - | Detail |
| C2H4g22999 | 4:25,953,653-25,956,392 | - | C1H4g18615 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C2H4g16283 | 4:25,966,213-25,968,916 | + | C1H4g12663 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g19837 | 4:25,979,243-25,984,049 | + | C1H4g19687 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g26708 | 4:25,984,843-25,987,348 | - | C1H4g27427 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C2H4g23112 | 4:25,990,395-25,992,751 | - | C1H4g27024 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| C2H4g27441 | 4:25,994,811-26,000,739 | - | C1H4g02875 | CX4g033004 | LOC_Os04g51060 | Os02g0700000 | - | Detail |
| C2H4g22306 | 4:26,004,241-26,006,549 | - | C1H4g14973 | CX4g034139 | LOC_Os04g51070 | Os04g0599300 | EAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD | Detail |
| C2H4g03863 | 4:26,011,461-26,017,698 | + | C1H4g26976 | CX4g034652 | LOC_Os04g51080 | Os04g0599400 | - | Detail |
| C2H4g03311 | 4:26,020,975-26,035,049 | + | C1H4g19631 | CX4g033723 | LOC_Os04g51090 | Os04g0599650 | - | Detail |
| C2H4g27597 | 4:26,035,983-26,038,810 | + | C1H4g29659 | CX4g034671 | LOC_Os04g51100 | Os04g0599700 | - | Detail |
| C2H4g20047 | 4:26,039,513-26,042,411 | + | C1H4g20555 | CX4g033831 | LOC_Os04g51110 | Os04g0599800 | CDC20.1 | Detail |
| C2H4g05473 | 4:26,042,841-26,047,868 | + | C1H4g01630 | CX4g035744 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| C2H4g10442 | 4:26,050,574-26,052,329 | + | C1H4g04836 | CX4g035030 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029271 | 3:9,310,695-9,311,758 | + | C1H3g08723 | C2H3g15045 | LOC_Os03g18740 | Os03g0299200 | - | Detail |
| CX3g025577 | 3:9,322,353-9,324,564 | - | C1H3g20574 | C2H3g09178 | LOC_Os03g18770 | Os03g0299600 | - | Detail |
| CX3g025927 | 3:9,331,173-9,333,104 | - | C1H3g08338 | C2H3g30408 | LOC_Os03g18790 | Os03g0299800 | - | Detail |
| CX3g025303 | 3:9,343,045-9,346,016 | + | C1H3g29390 | C2H3g01680 | LOC_Os03g18810 | Os03g0299900 | - | Detail |
| CX3g025517 | 3:9,347,675-9,349,021 | - | C1H3g08396 | C2H3g29698 | LOC_Os03g18820 | Os03g0300000 | - | Detail |
| CX3g030992 | 3:9,353,152-9,356,227 | - | C1H3g18508 | C2H3g28163 | LOC_Os03g18830 | Os03g0300200 | - | Detail |
| CX3g030790 | 3:9,356,305-9,361,861 | + | C1H3g23407 | C2H3g21841 | LOC_Os03g18840 | Os03g0300300 | - | Detail |
| CX3g027983 | 3:9,362,808-9,363,621 | + | C1H3g17735 | C2H3g29151 | LOC_Os03g18850 | Os03g0300400 | JIOsPR10 | Detail |
| CX3g030884 | 3:9,365,914-9,367,611 | - | C1H3g06825 | C2H3g16892 | LOC_Os03g18860 | Os03g0300500 | - | Detail |
| CX3g030501 | 3:9,375,872-9,376,624 | - | C1H3g00200 | C2H3g30255 | LOC_Os03g18880 | Os03g0300700 | - | Detail |
| CX3g028273 | 3:9,378,655-9,379,188 | + | C1H3g19128 | C2H3g22648 | - | Os03g0415500 | - | Detail |
| CX3g028981 | 3:9,380,602-9,383,927 | + | C1H3g08826 | C2H3g17031 | LOC_Os03g18890 | Os03g0300900 | - | Detail |
| CX3g030388 | 3:9,396,535-9,398,550 | + | C1H3g12713 | C2H3g21070 | LOC_Os03g18910 | Os03g0301200 | - | Detail |
| CX3g025857 | 3:9,407,173-9,408,009 | + | C1H3g28323 | C2H3g13460 | LOC_Os03g20190 | Os03g0821700 | - | Detail |
| CX3g027587 | 3:9,408,750-9,410,485 | + | C1H3g28323 | C2H3g13460 | LOC_Os03g18940 | Os03g0301400 | - | Detail |
| CX3g029287 | 3:9,412,733-9,414,746 | + | C1H3g10793 | C2H3g01957 | LOC_Os03g18950 | Os03g0301500 | - | Detail |
| CX3g025204 | 3:9,416,417-9,416,731 | - | - | - | - | - | - | Detail |
| CX3g028454 | 3:9,417,047-9,419,671 | + | C1H3g07825 | C2H3g01576 | LOC_Os03g18960 | Os03g0301600 | - | Detail |
| CX3g025125 | 3:9,421,304-9,424,292 | - | C1H3g28727 | C2H3g21248 | LOC_Os03g18970 | Os03g0301700 | - | Detail |
| CX3g026831 | 3:9,429,314-9,429,559 | - | - | - | - | - | - | Detail |