| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g03783 | 7:3,780,217-3,783,465 | - | C2H7g16319 | CX7g046571 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| C1H7g22816 | 7:3,789,335-3,792,475 | + | C2H7g13219 | CX7g046025 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| C1H7g08147 | 7:3,807,676-3,808,974 | - | C2H7g21054 | CX7g048026 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| C1H7g08163 | 7:3,832,487-3,833,275 | - | C2H7g27628 | CX7g049402 | - | Os07g0182601 | - | Detail |
| C1H7g17559 | 7:3,840,379-3,847,180 | + | C2H7g01878 | CX7g047392 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| C1H7g01208 | 7:3,883,980-3,887,626 | - | C2H7g05997 | CX7g049817 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| C1H7g01935 | 7:3,888,270-3,889,742 | + | C2H7g13555 | CX7g047842 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| C1H7g03119 | 7:3,909,043-3,910,595 | - | C2H7g11185 | CX7g049244 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| C1H7g16015 | 7:3,918,959-3,920,511 | + | C2H7g06349 | CX7g047415 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| C1H7g09330 | 7:3,921,171-3,929,205 | + | C2H7g15936 | CX7g046514 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| C1H7g00026 | 7:3,931,908-3,934,880 | - | C2H7g05786 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C1H7g02270 | 7:3,936,833-3,941,172 | - | C2H7g20869 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C1H7g21233 | 7:3,960,432-3,966,423 | + | C2H7g09570 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C1H7g04399 | 7:3,974,316-3,981,839 | + | C2H7g02745 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C1H7g17793 | 7:3,985,947-3,989,076 | + | C2H7g29336 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C1H7g13541 | 7:3,997,534-3,997,770 | - | C2H7g13139 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C1H7g15110 | 7:4,004,800-4,006,586 | - | C2H7g30045 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C1H7g31770 | 7:4,031,391-4,036,599 | + | C2H7g00916 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C1H7g06257 | 7:4,038,943-4,041,663 | + | C2H7g24863 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C1H7g14544 | 7:4,044,365-4,050,529 | + | C2H7g24828 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030647 | 3:9,193,577-9,194,026 | + | C1H3g03574 | C2H3g19945 | LOC_Os03g18530 | Os03g0296600 | FEB1 | Detail |
| CX3g027501 | 3:9,194,945-9,198,892 | + | C1H3g02938 | C2H3g00640 | LOC_Os03g18540 | Os03g0296700 | - | Detail |
| CX3g028835 | 3:9,201,887-9,204,320 | + | C1H3g26064 | C2H3g07011 | LOC_Os03g18550 | Os03g0296800 | - | Detail |
| CX3g028050 | 3:9,206,779-9,207,832 | - | C1H3g30555 | C2H3g30506 | LOC_Os03g18560 | Os03g0297000 | - | Detail |
| CX3g026566 | 3:9,208,482-9,210,133 | + | C1H3g12769 | C2H3g12490 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| CX3g025475 | 3:9,212,848-9,214,489 | + | C1H3g07511 | C2H3g04349 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| CX3g027573 | 3:9,216,794-9,219,932 | - | C1H3g00177 | C2H3g03893 | LOC_Os03g18590 | Os03g0297400 | - | Detail |
| CX3g027270 | 3:9,227,862-9,228,041 | + | - | - | - | Os02g0188201 | - | Detail |
| CX3g025598 | 3:9,233,000-9,233,683 | - | C1H3g05450 | C2H3g00141 | LOC_Os03g18600 | Os03g0297600 | OsPYL6 | Detail |
| CX3g026248 | 3:9,246,047-9,248,640 | + | C1H3g01318 | C2H3g24611 | LOC_Os03g18620 | Os03g0297700 | - | Detail |
| CX3g031004 | 3:9,250,109-9,252,743 | + | C1H3g30188 | C2H3g04152 | LOC_Os03g18630 | Os03g0297800 | - | Detail |
| CX3g030998 | 3:9,258,750-9,259,567 | + | C1H7g20360 | C2H7g10129 | LOC_Os03g13710 | - | - | Detail |
| CX3g028886 | 3:9,261,412-9,264,248 | + | C1H3g16689 | C2H3g14622 | LOC_Os03g18640 | Os03g0297900 | - | Detail |
| CX3g026355 | 3:9,269,218-9,269,766 | + | C1H3g05714 | C2H3g25925 | LOC_Os03g18660 | Os03g0298100 | - | Detail |
| CX3g027215 | 3:9,273,329-9,275,389 | + | C1H3g07440 | C2H3g07384 | LOC_Os03g18680 | Os03g0298300 | - | Detail |
| CX3g025175 | 3:9,278,642-9,282,052 | + | C1H3g06475 | C2H3g24260 | LOC_Os03g18690 | Os03g0298400 | - | Detail |
| CX3g031330 | 3:9,283,300-9,285,729 | - | C1H3g27200 | C2H3g02615 | LOC_Os03g18700 | Os03g0298600 | - | Detail |
| CX3g027965 | 3:9,287,315-9,293,093 | - | C1H3g23179 | C2H3g28411 | LOC_Os03g18710 | Os03g0298700 | - | Detail |
| CX3g028856 | 3:9,294,949-9,299,014 | - | C1H3g30107 | C2H3g22544 | LOC_Os03g18720 | Os03g0298800 | - | Detail |
| CX3g025541 | 3:9,304,162-9,304,344 | - | - | - | - | - | - | Detail |