| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028794 | 3:9,086,334-9,088,427 | + | C1H3g14801 | C2H3g30268 | LOC_Os03g18300 | Os03g0294100 | - | Detail |
| CX3g028900 | 3:9,089,436-9,102,625 | + | C1H3g25931 | C2H3g05313 | LOC_Os03g18310 | Os03g0294200 | OsF2KP2, FLO23 | Detail |
| CX3g027503 | 3:9,106,395-9,107,165 | + | C1H3g00522 | C2H3g04577 | LOC_Os03g18340 | - | - | Detail |
| CX3g028771 | 3:9,109,253-9,112,120 | - | C1H3g23335 | C2H3g01948 | LOC_Os03g18350 | Os03g0294600 | - | Detail |
| CX3g027365 | 3:9,116,685-9,120,880 | + | C1H3g31328 | C2H3g16769 | LOC_Os03g18360 | Os03g0294700 | OsETOL1, OsSTA97 | Detail |
| CX3g025695 | 3:9,122,486-9,125,347 | - | C1H3g11627 | C2H3g29602 | LOC_Os03g18370 | Os03g0294800 | - | Detail |
| CX3g028348 | 3:9,126,609-9,126,829 | - | - | - | - | - | - | Detail |
| CX3g025838 | 3:9,128,889-9,134,725 | - | C1H3g24108 | C2H3g22783 | LOC_Os03g18380 | Os03g0294900 | - | Detail |
| CX3g025257 | 3:9,136,012-9,140,361 | - | C1H3g20168 | C2H3g30641 | LOC_Os03g18410 | Os03g0295400 | - | Detail |
| CX3g028581 | 3:9,140,697-9,144,169 | + | C1H3g08126 | C2H3g21153 | LOC_Os03g18420 | Os03g0295500 | - | Detail |
| CX3g030446 | 3:9,147,473-9,150,166 | - | C1H3g20275 | C2H3g02295 | LOC_Os03g18430 | Os03g0295600 | - | Detail |
| CX3g025269 | 3:9,156,835-9,168,594 | + | C1H3g31205 | C2H3g07925 | LOC_Os03g18440 | Os03g0295700 | - | Detail |
| CX3g031348 | 3:9,169,532-9,170,956 | - | C1H3g26210 | C2H3g21710 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| CX3g027991 | 3:9,172,247-9,172,507 | - | C1H3g13974 | C2H3g11997 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| CX3g025833 | 3:9,173,131-9,175,032 | - | C1H3g12024 | C2H3g28045 | LOC_Os03g18470 | Os03g0295866 | - | Detail |
| CX3g028946 | 3:9,176,372-9,179,045 | - | C1H3g21811 | C2H3g22218 | LOC_Os03g18480 | Os03g0296000 | OsTDF1 | Detail |
| CX3g028263 | 3:9,180,989-9,182,024 | + | C1H3g02844 | C2H3g23079 | LOC_Os03g18490 | Os03g0296200 | - | Detail |
| CX3g027261 | 3:9,182,820-9,185,831 | - | C1H3g05929 | C2H3g17809 | LOC_Os03g18500 | Os03g0296300 | - | Detail |
| CX3g027883 | 3:9,186,458-9,189,184 | + | C1H3g03995 | C2H3g04518 | LOC_Os03g18510 | Os03g0296400 | - | Detail |
| CX3g027567 | 3:9,190,155-9,192,823 | + | C1H3g15230 | C2H3g25990 | LOC_Os03g18520 | Os03g0296500 | - | Detail |