| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01597 | 1:35,746,910-35,752,743 | - | C2H1g25723 | CX1g001516 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| C1H1g00107 | 1:35,785,776-35,788,010 | + | C2H1g29022 | CX1g006361 | LOC_Os01g69930 | Os01g0923800 | - | Detail |
| C1H1g02952 | 1:35,789,350-35,792,293 | - | C2H1g05728 | CX1g005730 | LOC_Os01g69940 | Os01g0923900 | - | Detail |
| C1H1g29264 | 1:35,799,799-35,801,270 | + | C2H1g01923 | CX1g005835 | LOC_Os01g69950 | Os01g0924000 | - | Detail |
| C1H1g10877 | 1:35,806,031-35,806,597 | + | - | CX1g002496 | LOC_Os01g69960 | Os01g0924200 | - | Detail |
| C1H1g10772 | 1:35,809,040-35,813,366 | - | C2H1g07961 | CX1g006541 | LOC_Os01g69970 | Os01g0924300 | - | Detail |
| C1H1g13895 | 1:35,823,618-35,824,574 | + | - | - | LOC_Os01g69980 | Os01g0924400 | - | Detail |
| C1H1g29827 | 1:35,829,371-35,836,055 | - | C2H1g18855 | CX1g005525 | LOC_Os01g69990 | Os01g0924600 | MHZ9 | Detail |
| C1H1g12982 | 1:35,840,514-35,841,436 | + | C2H1g15591 | CX1g002447 | LOC_Os01g70000 | Os01g0924700 | - | Detail |
| C1H1g07165 | 1:35,842,213-35,844,292 | - | C2H1g25318 | CX1g000477 | LOC_Os01g70010 | Os01g0924800 | - | Detail |
| C1H1g27548 | 1:35,847,736-35,853,749 | + | C2H1g12545 | CX1g006526 | LOC_Os01g70020 | Os01g0924900 | - | Detail |
| C1H1g13467 | 1:35,855,067-35,857,104 | + | C2H1g09893 | CX1g005950 | LOC_Os01g63480 | Os01g0924933 | DPW2 | Detail |
| C1H1g03684 | 1:35,861,149-35,861,667 | - | - | CX1g001933 | LOC_Os01g70050 | Os01g0924966 | - | Detail |
| C1H1g14986 | 1:35,874,545-35,890,346 | - | C2H1g12590 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C1H1g20180 | 1:35,891,826-35,894,737 | - | C2H1g27652 | CX1g005348 | LOC_Os01g70080 | Os01g0335700 | - | Detail |
| C1H1g31830 | 1:35,895,883-35,896,588 | - | C2H1g27652 | CX1g005348 | LOC_Os01g70080 | Os01g0925100 | - | Detail |
| C1H1g19559 | 1:35,898,782-35,901,274 | + | C2H1g21256 | CX1g006900 | LOC_Os01g70090 | Os01g0925200 | - | Detail |
| C1H1g13464 | 1:35,901,649-35,904,771 | - | C2H1g13602 | CX1g005045 | LOC_Os01g70100 | Os01g0925300 | - | Detail |
| C1H1g13112 | 1:35,908,415-35,909,209 | + | C2H1g09289 | CX1g002813 | LOC_Os01g70110 | Os01g0925400 | - | Detail |
| C1H1g25081 | 1:35,919,371-35,923,240 | + | C2H1g09731 | CX1g005897 | LOC_Os01g70120 | Os01g0925600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028794 | 3:9,086,334-9,088,427 | + | C1H3g14801 | C2H3g30268 | LOC_Os03g18300 | Os03g0294100 | - | Detail |
| CX3g028900 | 3:9,089,436-9,102,625 | + | C1H3g25931 | C2H3g05313 | LOC_Os03g18310 | Os03g0294200 | OsF2KP2, FLO23 | Detail |
| CX3g027503 | 3:9,106,395-9,107,165 | + | C1H3g00522 | C2H3g04577 | LOC_Os03g18340 | - | - | Detail |
| CX3g028771 | 3:9,109,253-9,112,120 | - | C1H3g23335 | C2H3g01948 | LOC_Os03g18350 | Os03g0294600 | - | Detail |
| CX3g027365 | 3:9,116,685-9,120,880 | + | C1H3g31328 | C2H3g16769 | LOC_Os03g18360 | Os03g0294700 | OsETOL1, OsSTA97 | Detail |
| CX3g025695 | 3:9,122,486-9,125,347 | - | C1H3g11627 | C2H3g29602 | LOC_Os03g18370 | Os03g0294800 | - | Detail |
| CX3g028348 | 3:9,126,609-9,126,829 | - | - | - | - | - | - | Detail |
| CX3g025838 | 3:9,128,889-9,134,725 | - | C1H3g24108 | C2H3g22783 | LOC_Os03g18380 | Os03g0294900 | - | Detail |
| CX3g025257 | 3:9,136,012-9,140,361 | - | C1H3g20168 | C2H3g30641 | LOC_Os03g18410 | Os03g0295400 | - | Detail |
| CX3g028581 | 3:9,140,697-9,144,169 | + | C1H3g08126 | C2H3g21153 | LOC_Os03g18420 | Os03g0295500 | - | Detail |
| CX3g030446 | 3:9,147,473-9,150,166 | - | C1H3g20275 | C2H3g02295 | LOC_Os03g18430 | Os03g0295600 | - | Detail |
| CX3g025269 | 3:9,156,835-9,168,594 | + | C1H3g31205 | C2H3g07925 | LOC_Os03g18440 | Os03g0295700 | - | Detail |
| CX3g031348 | 3:9,169,532-9,170,956 | - | C1H3g26210 | C2H3g21710 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| CX3g027991 | 3:9,172,247-9,172,507 | - | C1H3g13974 | C2H3g11997 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| CX3g025833 | 3:9,173,131-9,175,032 | - | C1H3g12024 | C2H3g28045 | LOC_Os03g18470 | Os03g0295866 | - | Detail |
| CX3g028946 | 3:9,176,372-9,179,045 | - | C1H3g21811 | C2H3g22218 | LOC_Os03g18480 | Os03g0296000 | OsTDF1 | Detail |
| CX3g028263 | 3:9,180,989-9,182,024 | + | C1H3g02844 | C2H3g23079 | LOC_Os03g18490 | Os03g0296200 | - | Detail |
| CX3g027261 | 3:9,182,820-9,185,831 | - | C1H3g05929 | C2H3g17809 | LOC_Os03g18500 | Os03g0296300 | - | Detail |
| CX3g027883 | 3:9,186,458-9,189,184 | + | C1H3g03995 | C2H3g04518 | LOC_Os03g18510 | Os03g0296400 | - | Detail |
| CX3g027567 | 3:9,190,155-9,192,823 | + | C1H3g15230 | C2H3g25990 | LOC_Os03g18520 | Os03g0296500 | - | Detail |