| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14276 | 6:2,409,330-2,409,740 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g13336 | 6:2,410,289-2,410,699 | + | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g17841 | 6:2,411,428-2,412,749 | - | C1H6g10484 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g26766 | 6:2,412,783-2,413,085 | - | C1H6g06000 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g20170 | 6:2,415,673-2,419,060 | - | C1H6g16222 | CX6g044314 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| C2H6g19792 | 6:2,425,862-2,428,256 | - | C1H6g16022 | CX6g045401 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| C2H6g23161 | 6:2,429,699-2,437,037 | - | C1H6g13902 | CX6g043739 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| C2H6g04920 | 6:2,440,742-2,441,143 | - | - | CX6g042247 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| C2H6g21185 | 6:2,447,612-2,448,320 | + | C1H6g16824 | CX6g043772 | LOC_Os06g06610 | Os06g0161400 | - | Detail |
| C2H6g23055 | 6:2,459,795-2,461,268 | + | C1H6g25939 | CX6g045596 | LOC_Os06g06660 | Os06g0161800 | - | Detail |
| C2H6g19839 | 6:2,463,500-2,464,735 | + | C1H6g28340 | CX6g045596 | LOC_Os06g06670 | Os06g0161900 | - | Detail |
| C2H6g03972 | 6:2,466,564-2,467,051 | + | C1H6g28340 | - | - | - | - | Detail |
| C2H6g09639 | 6:2,467,292-2,468,545 | + | C1H6g29965 | CX6g045596 | LOC_Os06g06680 | Os06g0162100 | - | Detail |
| C2H6g11445 | 6:2,472,834-2,473,430 | + | C1H6g29965 | - | LOC_Os06g06580 | Os06g0161100 | - | Detail |
| C2H6g23738 | 6:2,491,525-2,493,444 | + | C1H6g05484 | CX6g045922 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| C2H6g27712 | 6:2,494,006-2,505,037 | - | C1H6g16792 | CX6g045009 | LOC_Os06g06730 | Os06g0162550 | OsZAS2 | Detail |
| C2H6g18003 | 6:2,506,220-2,508,521 | + | C1H6g20899 | CX6g044673 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| C2H6g28937 | 6:2,509,188-2,515,333 | - | C1H6g08500 | CX6g042913 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| C2H6g12221 | 6:2,520,562-2,521,083 | - | - | CX6g042202 | - | - | - | Detail |
| C2H6g12042 | 6:2,521,710-2,526,662 | - | C1H6g00041 | CX6g044205 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026472 | 3:8,957,950-8,959,779 | + | C1H3g30153 | C2H3g23225 | LOC_Os03g18110 | Os03g0290900 | - | Detail |
| CX3g026408 | 3:8,966,363-8,969,671 | + | C1H3g18009 | C2H3g10304 | LOC_Os03g18120 | Os03g0291200 | - | Detail |
| CX3g030158 | 3:8,970,100-8,973,773 | - | C1H3g24409 | C2H3g15096 | LOC_Os03g18130 | Os03g0291500 | ASN1, OsASN1, OsAS1, AS1 | Detail |
| CX3g026069 | 3:8,992,941-8,993,654 | + | - | - | - | - | - | Detail |
| CX3g029744 | 3:8,995,931-9,000,064 | + | C1H3g22391 | C2H3g11917 | LOC_Os03g18140 | Os03g0291800 | - | Detail |
| CX3g026643 | 3:9,012,174-9,013,642 | + | C1H3g05911 | C2H3g26678 | LOC_Os03g18150 | Os03g0292100 | - | Detail |
| CX3g027477 | 3:9,020,611-9,023,725 | + | C1H3g07369 | C2H3g20112 | LOC_Os03g18160 | Os03g0292200 | - | Detail |
| CX3g030839 | 3:9,033,466-9,035,921 | + | C1H3g17889 | C2H3g05672 | LOC_Os03g18170 | Os03g0292700 | - | Detail |
| CX3g025459 | 3:9,037,230-9,039,621 | - | C1H3g01237 | C2H3g30223 | LOC_Os03g18180 | Os03g0292800 | - | Detail |
| CX3g030714 | 3:9,040,500-9,040,712 | + | C1H3g01195 | C2H3g08063 | - | - | - | Detail |
| CX3g026640 | 3:9,042,891-9,052,145 | - | C1H3g09425 | C2H3g00182 | LOC_Os03g18190 | Os03g0292900 | - | Detail |
| CX3g027666 | 3:9,054,807-9,058,130 | + | C1H3g30417 | C2H3g24196 | LOC_Os03g18200 | Os03g0293000 | - | Detail |
| CX3g029007 | 3:9,059,752-9,060,441 | + | C1H3g18813 | C2H3g19840 | - | Os03g0293100 | - | Detail |
| CX3g030471 | 3:9,061,828-9,064,967 | + | C1H3g03257 | C2H3g15900 | LOC_Os03g18210 | Os03g0293400 | - | Detail |
| CX3g027341 | 3:9,066,537-9,069,082 | - | C1H3g30760 | C2H3g03703 | LOC_Os03g18220 | Os03g0293500 | Ospdc2, PDC2 | Detail |
| CX3g029705 | 3:9,073,247-9,073,519 | + | - | - | LOC_Os03g18230 | Os03g0293600 | - | Detail |
| CX3g031345 | 3:9,074,108-9,074,365 | + | - | - | - | - | - | Detail |
| CX3g027094 | 3:9,079,306-9,079,515 | - | C1H3g18943 | C2H3g08331 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| CX3g026319 | 3:9,079,530-9,079,850 | - | C1H3g20557 | C2H3g19683 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| CX3g027241 | 3:9,082,872-9,084,519 | - | C1H3g18167 | C2H3g29031 | LOC_Os03g18290 | Os03g0294032 | - | Detail |