| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01705 | 3:7,440,887-7,448,461 | + | C2H3g11980 | CX3g031115 | LOC_Os03g15350 | Os03g0259300 | - | Detail |
| C1H3g16374 | 3:7,448,782-7,450,230 | - | C2H3g23041 | CX3g028643 | LOC_Os03g15360 | Os03g0259400 | - | Detail |
| C1H3g08146 | 3:7,453,868-7,455,772 | + | C2H3g02482 | CX3g027649 | LOC_Os03g15380 | Os03g0259600 | - | Detail |
| C1H3g29794 | 3:7,456,757-7,460,235 | - | C2H3g06614 | CX3g025462 | LOC_Os03g15390 | Os03g0259700 | - | Detail |
| C1H3g00578 | 3:7,465,141-7,469,334 | + | C2H3g21664 | CX3g026758 | LOC_Os03g15410 | Os03g0259900 | - | Detail |
| C1H3g24107 | 3:7,470,679-7,472,715 | + | C2H3g30516 | CX3g026569 | LOC_Os03g15420 | Os03g0260000 | - | Detail |
| C1H3g10606 | 3:7,473,235-7,477,891 | - | C2H3g29512 | CX3g025990 | LOC_Os03g15430 | Os03g0260100 | - | Detail |
| C1H3g15415 | 3:7,483,291-7,483,551 | - | C2H3g24218 | CX3g025180 | - | Os03g0260432 | - | Detail |
| C1H3g24057 | 3:7,490,790-7,492,293 | - | C2H3g02662 | CX3g027434 | LOC_Os03g11060 | Os03g0209000 | - | Detail |
| C1H3g04803 | 3:7,495,615-7,498,140 | + | C2H3g12059 | CX3g030990 | LOC_Os03g15440 | Os03g0260600 | - | Detail |
| C1H3g25766 | 3:7,507,380-7,508,892 | + | C2H3g02089 | CX3g026582 | - | Os03g0261100 | PLA2-II | Detail |
| C1H3g29084 | 3:7,513,659-7,517,981 | + | C2H3g03272 | CX3g029112 | LOC_Os03g15480 | Os03g0261500 | - | Detail |
| C1H3g27014 | 3:7,531,223-7,532,413 | - | C2H3g15693 | CX3g025214 | LOC_Os03g15530 | Os03g0261800 | - | Detail |
| C1H3g01966 | 3:7,544,768-7,554,424 | - | C2H3g11801 | CX3g031071 | LOC_Os03g15540 | Os03g0261900 | - | Detail |
| C1H3g00077 | 3:7,557,117-7,561,116 | + | C2H3g12029 | CX3g028948 | LOC_Os03g15550 | Os03g0262000 | - | Detail |
| C1H3g09649 | 3:7,566,020-7,568,888 | + | C2H3g02245 | CX3g029180 | LOC_Os03g15560 | Os03g0262100 | - | Detail |
| C1H3g05616 | 3:7,570,000-7,574,380 | - | C2H3g27971 | CX3g026565 | LOC_Os03g15570 | Os03g0262200 | - | Detail |
| C1H3g16946 | 3:7,578,762-7,592,531 | - | C2H3g16143 | CX3g027558 | LOC_Os03g15580 | Os03g0262300 | - | Detail |
| C1H3g00248 | 3:7,594,732-7,597,249 | - | C2H3g26303 | CX3g026755 | LOC_Os03g15590 | Os03g0262400 | - | Detail |
| C1H3g31150 | 3:7,600,431-7,601,183 | - | - | CX3g027849 | LOC_Os03g15110 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030728 | 3:8,686,675-8,690,856 | - | C1H3g02152 | C2H3g30073 | LOC_Os03g17590 | Os03g0284500 | - | Detail |
| CX3g026963 | 3:8,691,035-8,694,013 | + | C1H3g05023 | C2H3g08600 | LOC_Os03g17600 | Os03g0284600 | - | Detail |
| CX3g025121 | 3:8,698,162-8,699,567 | + | C1H3g06994 | C2H3g03614 | - | Os03g0284650 | - | Detail |
| CX3g025050 | 3:8,700,796-8,702,121 | + | C1H3g21431 | C2H3g12259 | LOC_Os03g17610 | Os03g0284800 | TOP6A3 | Detail |
| CX3g026635 | 3:8,704,508-8,712,751 | - | C1H3g26561 | C2H3g11357 | LOC_Os03g17634 | Os03g0284900 | - | Detail |
| CX3g031354 | 3:8,713,522-8,715,849 | + | C1H3g30930 | C2H3g28206 | LOC_Os03g17660 | Os03g0285100 | - | Detail |
| CX3g026969 | 3:8,718,332-8,718,559 | + | C1H3g11566 | C2H3g03876 | LOC_Os03g17670 | Os03g0285200 | - | Detail |
| CX3g026553 | 3:8,737,933-8,740,989 | + | C1H3g07669 | C2H3g06105 | LOC_Os03g17690 | Os03g0285700 | OsAPXa, OsAPX1 | Detail |
| CX3g029338 | 3:8,742,856-8,745,136 | - | C1H3g30823 | C2H3g17399 | LOC_Os03g17700 | Os03g0285800 | - | Detail |
| CX3g029635 | 3:8,748,060-8,751,185 | - | C1H3g12993 | C2H3g05165 | LOC_Os03g17710 | Os03g0285900 | OsRS2Z38 | Detail |
| CX3g025186 | 3:8,754,741-8,757,954 | + | C1H3g05382 | C2H3g24206 | LOC_Os03g17730 | Os03g0286200 | - | Detail |
| CX3g029393 | 3:8,763,316-8,767,273 | + | C1H3g30819 | C2H3g05135 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| CX3g028814 | 3:8,769,500-8,771,721 | - | C1H3g23357 | C2H3g11924 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| CX3g028365 | 3:8,780,574-8,783,306 | + | C1H3g16747 | C2H3g28874 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| CX3g026690 | 3:8,784,865-8,785,151 | - | C1H3g27086 | C2H3g08715 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| CX3g030677 | 3:8,788,330-8,790,269 | - | C1H3g29184 | C2H3g22847 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| CX3g026247 | 3:8,797,790-8,798,608 | - | C1H3g05095 | C2H3g20359 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| CX3g029968 | 3:8,813,185-8,818,215 | + | C1H3g02097 | C2H3g27675 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| CX3g025194 | 3:8,824,194-8,827,861 | + | C1H3g16177 | C2H3g09757 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| CX3g027864 | 3:8,830,387-8,832,403 | - | C1H3g12393 | C2H3g14774 | LOC_Os03g17860 | Os03g0287900 | - | Detail |