| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09563 | 1:25,515,887-25,517,528 | + | C1H1g29386 | CX1g001085 | LOC_Os01g49820 | Os01g0693300 | - | Detail |
| C2H1g14365 | 1:25,574,489-25,576,712 | - | C1H1g28615 | CX1g006741 | LOC_Os01g49900 | Os01g0693900 | - | Detail |
| C2H1g09264 | 1:25,581,027-25,584,323 | + | C1H1g20356 | CX1g002422 | LOC_Os01g49910 | Os01g0694000 | - | Detail |
| C2H1g01798 | 1:25,585,503-25,588,955 | + | C1H1g10906 | CX1g005199 | LOC_Os01g49920 | Os01g0694100 | - | Detail |
| C2H1g29437 | 1:25,590,982-25,595,590 | - | C1H1g14019 | CX1g005889 | LOC_Os01g49930 | Os01g0694200 | - | Detail |
| C2H1g02878 | 1:25,599,395-25,614,726 | - | C1H1g11575 | CX1g000910 | LOC_Os01g49940 | Os01g0694300 | - | Detail |
| C2H1g12436 | 1:25,623,513-25,629,371 | + | C1H1g23983 | CX1g003379 | LOC_Os01g50010 | Os01g0694900 | - | Detail |
| C2H1g09448 | 1:25,630,444-25,635,380 | + | C1H1g09854 | CX1g006314 | LOC_Os01g50032 | Os01g0695100 | OsPEAMT1 | Detail |
| C2H1g20938 | 1:25,637,468-25,641,622 | + | C1H1g24840 | CX1g000495 | LOC_Os01g50040 | Os01g0695200 | - | Detail |
| C2H1g12268 | 1:25,642,374-25,645,425 | - | C1H1g15839 | CX1g005052 | LOC_Os01g50050 | Os01g0695300 | OsFPS3 | Detail |
| C2H1g10720 | 1:25,646,281-25,648,972 | - | C1H1g09427 | CX1g001238 | LOC_Os01g50060 | Os01g0695600 | - | Detail |
| C2H1g19234 | 1:25,660,021-25,671,265 | + | C1H1g28535 | CX1g000682 | LOC_Os01g50080 | Os01g0290700 | - | Detail |
| C2H1g29650 | 1:25,671,761-25,672,246 | + | C1H1g24452 | CX1g004640 | - | - | - | Detail |
| C2H1g26297 | 1:25,673,106-25,679,579 | - | C1H1g20551 | CX1g004821 | LOC_Os01g50100 | Os01g0695800 | - | Detail |
| C2H1g18904 | 1:25,689,624-25,690,797 | + | C1H1g28063 | CX1g003608 | LOC_Os01g50110 | Os01g0695900 | Os2R_MYB11 | Detail |
| C2H1g25152 | 1:25,692,266-25,693,954 | + | C1H1g21196 | CX1g004393 | LOC_Os01g50120 | Os01g0696000 | - | Detail |
| C2H1g29550 | 1:25,694,361-25,695,957 | - | C1H1g00928 | CX1g001262 | - | Os01g0696100 | - | Detail |
| C2H1g29725 | 1:25,709,468-25,716,463 | + | C1H1g28913 | CX1g003854 | LOC_Os01g50160 | Os01g0290700 | - | Detail |
| C2H1g21453 | 1:25,738,425-25,739,296 | - | C1H1g01002 | CX1g006665 | LOC_Os01g50259 | Os01g0697700 | - | Detail |
| C2H1g03629 | 1:25,740,336-25,740,851 | - | C1H1g31100 | CX1g006665 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027101 | 3:8,542,808-8,545,171 | + | C1H3g04312 | C2H3g02883 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g025177 | 3:8,550,456-8,552,756 | + | C1H3g07058 | C2H3g04384 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g026382 | 3:8,561,353-8,565,309 | - | C1H3g16432 | - | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| CX3g029559 | 3:8,578,177-8,580,260 | - | C1H11g04596 | - | LOC_Os03g17110 | Os03g0643050 | - | Detail |
| CX3g027572 | 3:8,584,974-8,586,191 | + | C1H3g15208 | C2H3g12675 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| CX3g026586 | 3:8,586,573-8,589,077 | - | C1H3g13015 | C2H3g17220 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| CX3g027144 | 3:8,589,606-8,592,482 | + | C1H3g25350 | C2H3g11550 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| CX3g030233 | 3:8,601,331-8,609,003 | - | C1H3g15668 | C2H3g23509 | LOC_Os03g08400 | Os03g0855700 | - | Detail |
| CX3g025910 | 3:8,610,791-8,611,117 | + | - | - | LOC_Os03g10280 | - | - | Detail |
| CX3g025299 | 3:8,615,902-8,618,567 | + | C1H3g04825 | C2H3g16412 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| CX3g029292 | 3:8,619,425-8,621,694 | - | C1H3g31389 | C2H3g25427 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| CX3g030457 | 3:8,625,315-8,627,111 | - | C1H3g29978 | C2H3g26100 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| CX3g030456 | 3:8,627,875-8,631,687 | - | C1H3g13527 | C2H3g10500 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| CX3g031290 | 3:8,635,384-8,635,833 | - | - | - | - | Os03g0283750 | - | Detail |
| CX3g026672 | 3:8,636,387-8,642,427 | + | C1H3g19722 | C2H3g23371 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| CX3g029803 | 3:8,643,870-8,647,244 | - | C1H3g11797 | C2H3g29700 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| CX3g025210 | 3:8,648,315-8,650,375 | + | C1H3g07283 | C2H3g23379 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| CX3g025348 | 3:8,651,570-8,659,425 | - | C1H3g27931 | C2H3g10813 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| CX3g026952 | 3:8,684,398-8,685,066 | - | C1H3g12560 | C2H3g28337 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| CX3g028561 | 3:8,685,548-8,685,817 | + | - | - | - | - | - | Detail |