| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03768 | 12:5,237,373-5,239,799 | - | C2H12g07554 | CX12g015302 | LOC_Os12g11930 | Os12g0215950 | - | Detail |
| C1H12g06312 | 12:5,257,457-5,258,489 | - | C2H12g05098 | - | - | - | - | Detail |
| C1H12g10311 | 12:5,259,989-5,260,638 | - | C2H12g27099 | - | - | Os12g0220866 | - | Detail |
| C1H12g10827 | 12:5,260,997-5,262,429 | - | C2H12g17336 | - | - | - | - | Detail |
| C1H12g13011 | 12:5,277,732-5,280,434 | - | C2H12g13277 | CX12g018313 | LOC_Os12g11940 | Os12g0221000 | - | Detail |
| C1H12g05687 | 12:5,326,613-5,329,672 | + | - | - | - | - | - | Detail |
| C1H12g27034 | 12:5,337,557-5,337,766 | - | C2H12g27036 | CX12g015202 | LOC_Os12g11990 | Os12g0218100 | - | Detail |
| C1H12g28699 | 12:5,371,635-5,374,634 | + | C2H12g10554 | CX12g015654 | LOC_Os12g12010 | Os12g0221700 | - | Detail |
| C1H12g09583 | 12:5,396,475-5,399,422 | + | C2H12g05775 | - | - | - | - | Detail |
| C1H12g26433 | 12:5,424,529-5,427,486 | + | C2H12g20945 | CX12g015591 | LOC_Os12g12130 | Os12g0222900 | - | Detail |
| C1H12g04247 | 12:5,438,665-5,440,290 | + | C2H12g21896 | CX12g015104 | LOC_Os12g12170 | Os12g0223300 | - | Detail |
| C1H12g11389 | 12:5,460,140-5,460,770 | + | C2H12g04690 | CX12g016364 | LOC_Os12g12230 | Os12g0223700 | - | Detail |
| C1H12g11200 | 12:5,468,531-5,472,983 | - | C2H12g20015 | CX12g015147 | LOC_Os12g12260 | Os12g0224000 | - | Detail |
| C1H12g16489 | 12:5,494,654-5,496,312 | - | C2H12g25147 | CX12g016954 | LOC_Os12g12290 | Os12g0224400 | - | Detail |
| C1H12g06034 | 12:5,499,701-5,502,806 | - | C2H12g08364 | CX12g016952 | LOC_Os12g12300 | Os12g0224500 | - | Detail |
| C1H12g06995 | 12:5,512,030-5,519,603 | - | C2H12g19853 | CX12g018397 | LOC_Os12g12360 | Os12g0225100 | - | Detail |
| C1H12g12495 | 12:5,522,037-5,525,877 | + | C2H12g15241 | CX12g016289 | LOC_Os12g12370 | Os12g0225200 | - | Detail |
| C1H12g05918 | 12:5,526,254-5,531,287 | - | C2H12g06972 | CX12g017984 | LOC_Os12g12380 | Os12g0225300 | - | Detail |
| C1H12g24757 | 12:5,545,592-5,547,582 | + | C2H12g24297 | - | LOC_Os12g12470 | Os12g0225900 | - | Detail |
| C1H12g02089 | 12:5,565,410-5,571,613 | + | C2H12g00610 | - | LOC_Os12g12514 | Os12g0226400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027101 | 3:8,542,808-8,545,171 | + | C1H3g04312 | C2H3g02883 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g025177 | 3:8,550,456-8,552,756 | + | C1H3g07058 | C2H3g04384 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g026382 | 3:8,561,353-8,565,309 | - | C1H3g16432 | - | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| CX3g029559 | 3:8,578,177-8,580,260 | - | C1H11g04596 | - | LOC_Os03g17110 | Os03g0643050 | - | Detail |
| CX3g027572 | 3:8,584,974-8,586,191 | + | C1H3g15208 | C2H3g12675 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| CX3g026586 | 3:8,586,573-8,589,077 | - | C1H3g13015 | C2H3g17220 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| CX3g027144 | 3:8,589,606-8,592,482 | + | C1H3g25350 | C2H3g11550 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| CX3g030233 | 3:8,601,331-8,609,003 | - | C1H3g15668 | C2H3g23509 | LOC_Os03g08400 | Os03g0855700 | - | Detail |
| CX3g025910 | 3:8,610,791-8,611,117 | + | - | - | LOC_Os03g10280 | - | - | Detail |
| CX3g025299 | 3:8,615,902-8,618,567 | + | C1H3g04825 | C2H3g16412 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| CX3g029292 | 3:8,619,425-8,621,694 | - | C1H3g31389 | C2H3g25427 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| CX3g030457 | 3:8,625,315-8,627,111 | - | C1H3g29978 | C2H3g26100 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| CX3g030456 | 3:8,627,875-8,631,687 | - | C1H3g13527 | C2H3g10500 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| CX3g031290 | 3:8,635,384-8,635,833 | - | - | - | - | Os03g0283750 | - | Detail |
| CX3g026672 | 3:8,636,387-8,642,427 | + | C1H3g19722 | C2H3g23371 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| CX3g029803 | 3:8,643,870-8,647,244 | - | C1H3g11797 | C2H3g29700 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| CX3g025210 | 3:8,648,315-8,650,375 | + | C1H3g07283 | C2H3g23379 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| CX3g025348 | 3:8,651,570-8,659,425 | - | C1H3g27931 | C2H3g10813 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| CX3g026952 | 3:8,684,398-8,685,066 | - | C1H3g12560 | C2H3g28337 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| CX3g028561 | 3:8,685,548-8,685,817 | + | - | - | - | - | - | Detail |